Staphylococcus capitis subsp. capitis: AYP1020_0559
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Entry
AYP1020_0559 CDS
T03970
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scap
Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scap03032
]
AYP1020_0559 (topA)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_0559 (topA)
Enzymes [BR:
scap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AYP1020_0559 (topA)
DNA replication proteins [BR:
scap03032
]
Prokaryotic type
DNA Topoisomerases
AYP1020_0559 (topA)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYP1020_0559 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
RNA_POL_M_15KD
Toprim_2
Porphyrn_cat_1
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
AKL91706
LinkDB
All DBs
Position
555734..557803
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIRGK
GPVVKDLKKYAKKAKKVFLASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAVKD
SFKHPRGIEMDLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPYKLNTKEDVEKITTALDGDQFEITN
VNKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTIGLITYMR
TDSTRISDSAKSEAHNYITDKYGKEYVSKRKATGKQGDQDAHEAIRPTSTLRTPDEMKPY
LTRDQHRLYKLIWERFVASQMAPAILDTIALDVTQNDIKFRANGQTIKFKGFMTLYVEAK
DDKDNDKENKLPKLEEGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKLESKRFVPTELGEIVYEQVQEYFPEIIDVEFTVNMETLLDKIAEGDTN
WRKVVGDFYNSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKSIGVTCPKCNEGEVVERKSKKNRIFYGCSQYPDCDFISWDKPVGRECPK
CNHYLVDKKKGRSSQVVCSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatttagtcatagttgagtcgcctgcaaaagctaaaaccattgaaaaatat
ttaggaaaaagatacaaagttatcgcttcaatgggacacgtacgtgacttgcctagaagt
caaatgggtgtcgatactgaagataactatgaaccaaaatatattacaattcgcggtaaa
ggtccggttgttaaagatttaaagaaatatgctaaaaaagctaaaaaagtttttctcgct
agtgaccccgaccgtgaaggtgaagcgattgcctggcatttatcaaaaattttagaacta
gaagactcaaaagaaaacagagtagtattcaatgaaattacaaaagatgcggtaaaagat
agtttcaaacaccctagaggtattgaaatggatttagttgatgctcagcaagcacgtcgt
attctagatagactcgtgggttataatatctctcctgtattatggaagaaagttaaaaaa
ggtttatctgcaggacgtgttcagtcagtagctcttcgtttagttatcgaccgagaaaat
gaaatacgtaatttcaaaccagaagaatattggactattgaaggggaatttagatataaa
aagtctaaatttaatgctaagttcctccattataaaaataaaccttacaaattaaataca
aaagaagacgttgagaaaattacaacagctcttgatggagatcaatttgaaattacgaat
gtaaataagaaagaaaaaacacgtaatccagctaacccatttactacttcaacccttcaa
caagaagctgcacgtaagttaaacttcaaagctcgtaaaactatgatgttagcgcaacaa
ctatatgaaggtattgatttaaaacgtcaaggtactatcggtttgattacttacatgcgt
acagattctacacgtatatcagactctgcaaagtcagaagctcataactatattactgat
aaatatggtaaagaatatgtgtctaaacgtaaggcaaccggtaaacaaggtgaccaagat
gcccatgaagcgattagacctacaagtactttaagaactccagatgaaatgaaaccttat
ttaactagagatcaacatcgtctgtataaattaatttgggaacgttttgtggcaagccaa
atggctccagcaattttggatactattgcactcgatgttactcaaaatgatattaaattt
agagcaaatggtcagactataaaattcaaaggtttcatgacactatatgttgaagctaaa
gatgataaagacaatgataaagaaaacaaacttcctaaattagaggaaggcgataaagtt
acagcaactcaaattgaacctgcacaacactttactcaaccacctccacgttatacagaa
gcacgtttagttaagacgctagaggaacttaaaataggaagaccttcaacttatgctccg
actatagatactattcaaaagcgtaactacgttaaattagaaagtaaacgattcgtacca
acagaacttggcgaaattgtttatgaacaagtccaagagtacttcccagaaattattgat
gtagagtttactgttaacatggaaactttattagataaaatagctgagggagatacgaat
tggcgtaaagtagttggtgatttttataatagtttcaagcaagatgttgaacgtgctgaa
gaggaaatggaaaaaatagaaattaaagacgaaccagctggagaagattgtgaagtctgt
ggttcacctatggttattaaaatgggaagatatggtaagtttatggcttgttctaatttc
cctgattgtcgaaatactaaagctatagttaaatctatcggagtaacatgtcctaaatgt
aatgagggtgaagtagttgaacggaaatccaagaagaatagaatattttacggatgctct
caataccctgattgtgacttcatttcttgggataaaccagtaggaagagaatgtcctaaa
tgtaaccactacttagtagataagaaaaaaggtagaagtagccaggtcgtttgttctaac
tgtgattacaaggaagaagttcaaaaatag
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