Staphylococcus capitis subsp. capitis: AYP1020_2059
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Entry
AYP1020_2059 CDS
T03970
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scap
Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scap03032
]
AYP1020_2059 (gyrB)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_2059 (gyrB)
Enzymes [BR:
scap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AYP1020_2059 (gyrB)
DNA replication proteins [BR:
scap03032
]
Prokaryotic type
DNA Topoisomerases
AYP1020_2059 (gyrB)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AYP1020_2059 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKL93147
LinkDB
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Position
complement(2128869..2130800)
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AA seq
643 aa
AA seq
DB search
MVNTLSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEAL
AGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVS
GGLHGVGSSVVNALSQDLEVYVYRNDTIYHQAYKKGVPQFDLKEIGETDQTGTAIRFKAD
GKIFTETTVYNYETLQQRIRELAFLNKGIQITLRDEREEEGREDSYHYEGGIKSYVELLN
ENKEPLHEEPIYIHQTKDDIEVEIALQYNSGYATNLLTYANNIHTYEGGTHEDGFKRALT
RILNSYGIQSKIIKEDKDKLSGEDTREGLTAIISIKHGDPQFEGQTKTKLGNSEVRQVVD
KLFAEYFERFLFEHPAVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADC
SSKNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQM
ITAFGTGIGGEFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQ
PPLYKLTQGKQKYYVFNDRELDKLKAELNPTPKWSISRYKGLGEMNADQLWETTMNPEHR
SMLQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLDF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatacattgtcagatgtaaacaacacagataattatggtgctggacagatacaa
gtattagaaggtcttgaagcggtgcgtaaaagaccaggtatgtatattggttcaacttct
gaaagaggcttgcaccatttagtatgggaaattgttgataatagtattgacgaagcatta
gcaggttatgctaatcaaatagaagtcgtaattgagaaagacaattggataaaagttact
gacaatggccgtggaattccagttgatattcaggagaaaatgggacgtcctgctgtcgaa
gttatcttaacggtattacatgctggaggtaaattcggcggtggcggatataaagtatca
ggtgggcttcatggtgttggttcatcagtagttaacgcgctttcccaagacttagaagta
tatgtgtacagaaatgatactatttaccaccaagcgtataaaaaaggtgtacctcaattt
gacttaaaagaaatcggtgaaacagatcaaacaggtacggcaattcgttttaaagctgat
ggcaaaatttttacagagacaactgtttataattatgaaacattacaacaacgtatacgc
gaacttgctttcttaaacaaaggtatccaaattacgttaagagatgagcgtgaagaggaa
ggccgtgaggattcatatcactatgaaggcggtattaaatcttacgtagaattattaaat
gaaaataaagagccacttcatgaagaacctatctacatacatcaaacaaaagatgatatt
gaggttgaaatcgctcttcaatataacagtggatatgcgactaacttattaacatatgcc
aataacattcatacgtacgaaggtggtacgcacgaagatggcttcaaacgtgcgttaaca
cgtattcttaatagttacggtattcaaagtaagattattaaagaagacaaagataaactt
tcaggtgaggatacacgtgaaggtctaacagctattatttcaatcaaacacggcgatcct
caattcgaaggacaaactaaaacgaaattaggtaactctgaagtacgtcaagtagtggat
aaattattcgctgaatacttcgagcgtttcttattcgagcatcctgccgtaggtcgaatt
atcgttgaaaaaggtatcatggcgtctagagcacgagtagcagctaaaaaagcacgtgag
gttacacgacgtaaatcagcattagatgtatcaagtttacctggtaaattagcggattgc
tctagtaaaaatcctgaagagagtgagattttcttagtagagggtgactctgccgggggg
tctacaaaatcaggtcgtgattcaagaactcaagcgattttaccgttaagaggtaaaatt
ctgaacgtggaaaaagcacgtttagaccgtatcctaaataacaatgaaattcgccaaatg
atcactgcttttggtacaggtattggtggagaatttgatatttcaaaagcacgctatcat
aaaatcgtaatcatgactgatgcggacgttgatggtgcgcatatcagaacgctattactc
acattcttctatcgctttatgagaccgttaattgaagcgggctatgtttatattgctcag
ccacctttatacaaattaacgcaaggtaaacaaaagtattatgtatttaacgatagagag
ttagacaagcttaaagctgaattaaaccctactcctaaatggtcaatctctcgttacaaa
ggtcttggtgagatgaatgcagaccaattatgggaaacgactatgaatccagaacatcgt
tcaatgttacaagtaagacttgaagatgcaattgatgcagaccaaacatttgaaatgtta
atgggtgatgttgttgaaaatcgtagacaatttatagaagataatgcagtttacgccaac
ttagatttctaa
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integrated database retrieval system
