KEGG   Streptomyces scabiei: SCAB_51851
Entry
SCAB_51851        CDS       T01187                                 
Name
(GenBank) putative sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
scb  Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:scb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scb03021]
    SCAB_51851
Transcription machinery [BR:scb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCAB_51851
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF134 HTH_23 HTH_30 GerE HTH_50 DUF6362 FAP
Other DBs
NCBI-ProteinID: CBG72222
UniProt: C9YV26
LinkDB
Position
5767707..5768375
AA seq 222 aa
MTHAQRFRDIYEECYPRVLAYATSLVGRQVGEDITSETFTVAWRRVRDIPRPPLPWLLGV
ARNLVRELRRRDAHQYALAAAEAQQIGRGARGETGDVAADVTERDAALQALASLSEADRE
LLTLIAWHGLSARQAARVLGCTTATLTVRLHRARRRLEKALDPAHPAHPAHPAHPAHPAP
AAPVRKAHSTPPVPPASPTPPVPPTPHAPQAPGRTDRRGALT
NT seq 669 nt   +upstreamnt  +downstreamnt
gtgactcatgcgcaacgcttcagggacatctacgaggagtgctatccacgcgtcctcgcc
tacgccaccagcctggtgggacggcaggtgggggaggacatcaccagcgagaccttcacc
gtggcctggcggcgggtacgggacatcccgcgccccccgctgccctggctcctgggggtc
gcccgcaacctggtgcgcgaactgcgccgccgcgacgcccaccagtacgccctcgccgcc
gcggaggcacagcagatcggccgcggtgcccgcggcgagaccggtgacgtcgcggcggac
gtgaccgaacgggacgccgcgctgcaggcgctggcgagcctgtccgaggccgaccgtgag
ctgctgacactcatcgcctggcacgggctgagcgcccggcaggccgcccgggtcctgggc
tgcaccaccgcgacgctgaccgtccggctgcaccgggcccgccgccgtctggagaaggcc
ctggatccggcacacccggcacacccggcgcacccggcgcacccggcgcacccggccccg
gcggcccccgtacggaaggcgcactccacgccgcccgtcccacccgcatcccccacaccg
cccgtaccgcccacaccccacgcgccccaggcccctggccgcaccgatcgcagaggagca
ctcacgtga

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