Streptomyces scabiei: SCAB_51851
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Entry
SCAB_51851 CDS
T01187
Name
(GenBank) putative sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scb03021
]
SCAB_51851
Transcription machinery [BR:
scb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAB_51851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_23
HTH_30
GerE
HTH_50
DUF6362
FAP
Motif
Other DBs
NCBI-ProteinID:
CBG72222
UniProt:
C9YV26
LinkDB
All DBs
Position
5767707..5768375
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AA seq
222 aa
AA seq
DB search
MTHAQRFRDIYEECYPRVLAYATSLVGRQVGEDITSETFTVAWRRVRDIPRPPLPWLLGV
ARNLVRELRRRDAHQYALAAAEAQQIGRGARGETGDVAADVTERDAALQALASLSEADRE
LLTLIAWHGLSARQAARVLGCTTATLTVRLHRARRRLEKALDPAHPAHPAHPAHPAHPAP
AAPVRKAHSTPPVPPASPTPPVPPTPHAPQAPGRTDRRGALT
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgactcatgcgcaacgcttcagggacatctacgaggagtgctatccacgcgtcctcgcc
tacgccaccagcctggtgggacggcaggtgggggaggacatcaccagcgagaccttcacc
gtggcctggcggcgggtacgggacatcccgcgccccccgctgccctggctcctgggggtc
gcccgcaacctggtgcgcgaactgcgccgccgcgacgcccaccagtacgccctcgccgcc
gcggaggcacagcagatcggccgcggtgcccgcggcgagaccggtgacgtcgcggcggac
gtgaccgaacgggacgccgcgctgcaggcgctggcgagcctgtccgaggccgaccgtgag
ctgctgacactcatcgcctggcacgggctgagcgcccggcaggccgcccgggtcctgggc
tgcaccaccgcgacgctgaccgtccggctgcaccgggcccgccgccgtctggagaaggcc
ctggatccggcacacccggcacacccggcgcacccggcgcacccggcgcacccggccccg
gcggcccccgtacggaaggcgcactccacgccgcccgtcccacccgcatcccccacaccg
cccgtaccgcccacaccccacgcgccccaggcccctggccgcaccgatcgcagaggagca
ctcacgtga
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