Parasphaerochaeta coccoides: Spico_1678
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Entry
Spico_1678 CDS
T01469
Name
(GenBank) Chaperone protein dnaK
KO
K04043
molecular chaperone DnaK
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spico_1678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scc03019
]
Spico_1678
03110 Chaperones and folding catalysts [BR:
scc03110
]
Spico_1678
03029 Mitochondrial biogenesis [BR:
scc03029
]
Spico_1678
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scc04147
]
Spico_1678
Messenger RNA biogenesis [BR:
scc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Spico_1678
Chaperones and folding catalysts [BR:
scc03110
]
Heat shock proteins
HSP70 / DNAK
Spico_1678
Mitochondrial biogenesis [BR:
scc03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Spico_1678
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Spico_1678
Exosome [BR:
scc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Spico_1678
Exosomal proteins of breast cancer cells
Spico_1678
Exosomal proteins of colorectal cancer cells
Spico_1678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FapA
Vfa1
Motif
Other DBs
NCBI-ProteinID:
AEC02876
UniProt:
F4GKJ3
LinkDB
All DBs
Position
complement(1988935..1990863)
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AA seq
642 aa
AA seq
DB search
MARIIGIDLGTTNSCVAIMDGKEPMVIANSEGQRTTPSVVGFTSKGDRLVGQPAKNQIVT
NAENTVYSIKRFMGRKYHEVPDELGTIPYKVVTGPNDEIRVDIRGTLHSPQEISALILQK
MKKTAEDYLGAPVTEAVITVPAYFNDAQRQATKDAGKIAGLEVKRIVNEPTAAALAYGFG
KGSNKEEKIAVYDLGGGTFDISILELGDGVFEVKSTNGDTHLGGDNFDQRIIEWMINEFK
AGTGVDLSRDTMALQRLKEAAEKAKIELSASSQTEINLPFITADASGPKHLQMSLTRARF
EQMVSDLIERTKQPCLNALRDAGLKAADIDEVILVGGSTRVPAVQETVRALFGKEPHKGV
NPDEVVAMGAAIQGGILGGDVKDVLLLDVTPLSLGIETLGGVMTRLIERNTTIPTHKSQI
FSTAADSQTAVSIHVLQGEREMAGQNRTLGNFDLVGIPAAPRGVPQIEVSFDIDANGIVH
VSAKDLGTGKEQKIRIESSSGLSESEIDKMVKEAETHAAEDKRERARIDARNEADGLVYS
TEKSLKEYGDKVSADDKAKIEAALSDLKATLQDTSSNAEDLKAKSETLQQAAYKLAEEMY
KKTQQQGDPANAGASDAGASSGASSGGKGADGAEDADFEVVD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaataataggtattgacctggggacgacaaactcctgcgtagccatcatggat
ggcaaggaacctatggtcatagccaactcggaaggacagcgcactacaccttctgtcgtt
ggttttacctccaaaggcgaccgcctcgtcggtcagcccgcaaagaaccagattgtgacc
aatgcagaaaatacagtgtactccatcaaaaggttcatgggtcggaagtaccatgaagta
cccgatgagcttggtaccatcccgtataaagtggtcaccggaccgaatgatgagattcgc
gtggacatccgcggaaccctgcattccccacaggagatttccgccctgatcctccagaaa
atgaagaagactgccgaagactatctgggggctccggtaacagaagcagtcattacggtt
ccggcgtatttcaatgatgcccagcgtcaggctacgaaggatgctggaaagatagctggt
cttgaagtaaagaggattgtcaacgagcctaccgccgccgctcttgcgtatgggtttggc
aaaggctcgaacaaggaagaaaaaatcgctgtctacgacttgggcggcggtacgttcgac
atatccatcctggaattgggagatggtgtctttgaagtaaagagtaccaacggtgacacc
caccttggcggagacaactttgaccagcgcatcatagagtggatgatcaatgaattcaag
gcgggaaccggcgttgacctgtccagggatacaatggctctgcaacgtttgaaggaagcg
gctgagaaagcaaagattgaactgtctgcgtcttcccagactgaaatcaacctgccgttc
atcactgcggacgcttccgggccgaaacatctccagatgtccttgacccgcgcccgtttc
gagcaaatggtttctgacctcattgagagaaccaagcagccctgcctgaatgctttgaga
gatgcaggactgaaggcggcggatattgatgaagtcattctggtcggaggatcgacccgt
gtgccggccgtgcaggaaacagtccgtgccctgttcggcaaggagccgcacaaaggcgtg
aaccctgatgaagtcgtcgcaatgggtgctgcaatccaggggggtatcctgggcggggat
gtcaaggatgtccttctgttggatgtcacgccgctttcgttgggcatagagacccttggc
ggagtcatgacccggctgattgagcgcaatacgaccatcccgacccataagagtcagatt
ttctccactgcggctgatagccagactgccgtgagcatccacgttctccagggagagcgc
gagatggcaggacagaaccgcacgctcggtaattttgacttggtcggcattcctgccgcg
ccccgcggagttccgcagattgaagtgagcttcgatatcgatgccaatggtatcgtgcat
gtttccgcaaaagacttgggaaccggtaaggaacagaaaatacgcattgaatcgtcttcg
ggattatccgagtctgagattgataagatggtcaaggaagcggaaacccatgcggcggaa
gacaagcgcgaacgcgcccgcatcgatgcccgcaatgaagcggacggtttggtctattcc
acggagaagtccttgaaggagtacggcgataaggtatccgctgatgacaaggcgaagatt
gaggcggctctttccgacctgaaggcgaccctccaggatacttcctccaatgcggaagac
ctcaaggcaaagagcgaaacgctccagcaggctgcctataagctggcggaggagatgtac
aagaagacgcagcagcagggagacccggcgaacgccggagcttccgacgccggagcgtcc
tcaggtgcttcttccggtggaaaaggtgctgatggcgctgaagatgctgactttgaagtt
gtagactga
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