Gracilinema caldarium: Spica_0201
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Entry
Spica_0201 CDS
T01573
Name
(GenBank) Recombination protein recR
KO
K06187
recombination protein RecR
Organism
scd
Gracilinema caldarium
Pathway
scd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spica_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scd03400
]
Spica_0201
DNA repair and recombination proteins [BR:
scd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spica_0201
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Spica_0201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH
HHH_5
IMS_HHH
RH_dom
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEJ18369
UniProt:
F8EYD7
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All DBs
Position
complement(229261..229848)
Genome browser
AA seq
195 aa
AA seq
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MNAIDRLVGLLTKLPGIGKKTAGRLAYFILDADPSYARQLAEELQSLHSHIRRCSVCGSF
TETDPCTICTDPGRDQHILCVVERAQDVRVIEEGHEYRGRYHVLGGLIAPLDGIGPEKLA
IGQLVNRIHRGGITEVILALNPTVEGDTTALYLHKILKETGVQVSRLASGLPVGGDLEYA
DRLTLSRSFRGRIPM
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctatcgatcgcttagtgggcctcttgaccaaacttccgggaatcggaaaaaaa
actgcaggacggctcgcttattttatactcgacgctgatccaagttatgcccgacaattg
gctgaagaactccagagtctccacagtcatattcgacgctgttctgtctgcggcagtttt
acggaaactgacccctgcaccatctgcactgatccggggagagatcagcatatactctgc
gttgtggaacgggctcaggatgtgcgggttatcgaggaagggcatgaatatcgggggcgc
taccatgtgcttggtgggcttattgcgccgttggatggcatcggcccagaaaaactcgct
atcggccaattagtaaaccgtattcaccgcggaggcattactgaggttattttggcttta
aatcccaccgtggaaggggacactaccgctctatatttacacaagattttaaaagaaaca
ggtgtacaggtatctcgccttgcttcgggacttcctgtcgggggcgatctggaatatgca
gatcggctaaccctttcacgcagtttccgcggccgaattcccatgtag
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