Gracilinema caldarium: Spica_1190
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Entry
Spica_1190 CDS
T01573
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
scd
Gracilinema caldarium
Pathway
scd00020
Citrate cycle (TCA cycle)
scd00620
Pyruvate metabolism
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01120
Microbial metabolism in diverse environments
scd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Spica_1190
00620 Pyruvate metabolism
Spica_1190
Enzymes [BR:
scd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Spica_1190
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GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
AEJ19336
UniProt:
F8F0J2
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Position
complement(1338907..1340673)
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AA seq
588 aa
AA seq
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MTIRPIIDATFAKTQFEKIPLEPRFLRNDQSSLYIEPSVLTKLAEEAFVRISYYLRPSHL
KLWSEQLNSNTLTANDRLVLETLLKNALISAEGKLPLCQDTGTATIIGWKEESVRTGAED
GEALSNGVLQAYTGHPLRASQVGFRSLFDEFDTGNNLPAQIHIEAVRDNSEGPEYRFLFI
AKGGGSANKTALFQMTKALLEPETFKAFLKEKIAALGTAACPPYRLAVVVGGTSPEENLS
ILKLATTELLDTAPRMESAFKNNGSHWLYRDTEWESILMNITRESGLGAQFGGSLLALDA
RLIRLPRHAGSCPVSIGVSCSAHRNMLAKINSQGLWLEKLEYHPLEFLKQEGGASAKLAE
AFQYKKELKTKGQGSSINIALASENLQISAHPVASISIRHINLDQGIKPALEALRGTRAG
DRLLLSGYLLVARDAAHLKWHEALLRGETLPEYLTKHPIYYAGPAATPRGKVIGSFGPTT
AQRMDSYAEELMSRGASLITLAKGNRTKAWAEACKTYGGFYLGTIGGAAALIAEENILES
EILDYPELGMEAVRRIRVQDLLAFVIIDDQGRDLYNPIGMPTGQASDR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcgtccgattattgatgctacttttgcaaaaacccaattcgaaaagataccc
ttggagccccgtttcttgcgcaatgatcagagctctctctatattgaaccatcggtcctc
acaaaacttgcagaagaagcctttgtgcgcatctcctattatcttcggccaagccacctc
aaactgtggtcagaacagctcaactcaaacaccctcacagccaatgaccgcctggttctc
gaaacccttttaaagaatgcccttatttccgccgaaggcaagctccccctctgtcaggat
acgggaaccgcaactattatcggctggaaagaagaatcggttcgcacaggggcagaggat
ggggaagccttaagcaacggagtcctgcaagcctatacgggacatccccttcgtgcaagt
caggtcgggtttcgtagcctttttgacgaatttgatacaggaaacaacctccctgcccag
atccatatagaagcagtccgggacaacagcgaaggtcctgaataccgctttctctttatc
gccaaaggaggaggttcggccaataaaactgcactgttccagatgaccaaggcacttcta
gaaccggagacatttaaggcatttctcaaggaaaagattgctgccctaggaaccgccgcc
tgcccaccctaccggcttgcggtagtagttgggggaaccagcccggaagaaaatttgagc
atcctgaaacttgcaacgactgaactattggatacagcccctaggatggaatcagccttc
aaaaacaacggatcacattggctgtatcgggatactgaatgggaatccatattgatgaat
ataacccgggaaagcggccttggtgcccagttcggcggcagtctgcttgctttggatgcc
cggcttatccgcctgccccgccatgcgggatcctgccccgtttccatcggtgtctcctgt
tcagcccaccgcaacatgctcgcgaaaataaacagtcaggggctctggcttgaaaaactg
gaatatcatccgctggagtttctgaaacaggagggcggcgcttcagcaaaactggcagaa
gcatttcagtacaaaaaagaactcaagacaaaaggacagggcagttcaattaacatagcg
ctggccagtgaaaatctgcaaatctcagctcatcccgttgccagcatatcaatacggcac
atcaacctggatcagggaataaagcctgccctcgaagctctccgaggaacccgtgctggg
gatcggctgctcctttcgggatacctcctcgttgcccgtgatgcggcccacctgaaatgg
cacgaagcactcctacggggagaaaccttaccggagtatcttactaaacatcccatttat
tacgcaggccctgcggctacccctcgaggcaaggttattggcagtttcggccccaccaca
gcccagcgaatggattcttatgcggaggaactcatgagtcggggtgcaagcctcataacc
ttagcaaaaggcaatcgaacgaaagcctgggcagaggcatgcaaaacctatggtggcttt
tatctgggcaccattggcggagcggccgcccttatcgcggaggaaaatatcctggaaagc
gaaattctcgattatccggaacttggcatggaagcagttcggcgtattagagtgcaggac
cttcttgcctttgtcattatcgatgaccagggccgtgacctatacaatcctatcgggatg
cccaccgggcaagccagcgatcgataa
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