Gracilinema caldarium: Spica_1972
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Entry
Spica_1972 CDS
T01573
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
scd
Gracilinema caldarium
Pathway
scd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spica_1972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scd03400
]
Spica_1972
DNA repair and recombination proteins [BR:
scd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spica_1972
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Spica_1972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEJ20101
UniProt:
F8EXT7
LinkDB
All DBs
Position
complement(2195853..2196611)
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AA seq
252 aa
AA seq
DB search
MSRSRTYTALVLQVRQSGEQNREAIFFTLEEGILRATLFGGPKSKLRSYVSPFHQGKLWI
YEDPVRNTKKITDFDVQFWRPTLRESYAKLMAGSTMLEIVIASQGGGGTWKEAFELTTES
IEVLNRITEASIPILITYFVWNWLNLMGILPELDQCERCACTVRADEVVWYSSSEQQVLC
DFCAEPVKKTIQTGLFPINGGGRRWISRILELPASQVERYRVDEATQTQVQHLGTALLQQ
TLGTPVRYWEIL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagcagaacctatacagcccttgtactccaggtgcggcaaagcggtgaacag
aaccgagaagcgatcttttttactctggaagagggtatactgcgggccacactttttgga
ggtccgaaaagtaaacttcgatcctatgtatccccctttcatcagggtaagctctggatc
tacgaggatccggttaggaacactaaaaaaataactgattttgatgtacaattctggcgg
cccacccttcgggaatcctatgcaaaacttatggcaggttcaaccatgttggaaattgtt
attgcaagccagggaggaggtggcacctggaaagaagcctttgaactaaccactgagagt
atcgaagtgttgaataggataaccgaagctagtattcctatacttattacttattttgta
tggaattggttaaacctgatgggcatccttcctgaattagaccagtgtgaacgttgtgct
tgcacagtccgagcggatgaagtagtatggtactcttcttcggaacaacaggtgctatgc
gatttctgtgcagaaccggtgaagaaaacaatacagacagggcttttcccgataaacggg
ggtgggcgtcggtggatttccagaatattggaacttccagccagtcaggtagagcgttac
cgtgtggatgaggctacccagacacaagtacaacatttaggtacagcactcctgcaacag
acccttggaactcccgttcgctattgggaaatcttgtaa
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