Gracilinema caldarium: Spica_2840
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Entry
Spica_2840 CDS
T01573
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
scd
Gracilinema caldarium
Pathway
scd00500
Starch and sucrose metabolism
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Spica_2840
Enzymes [BR:
scd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Spica_2840
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GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Isoamylase_C
ISOA1-3_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AEJ20933
UniProt:
F8F2F1
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All DBs
Position
complement(3204784..3206937)
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AA seq
717 aa
AA seq
DB search
MAKLQYSIENGKPLPLGTEITSTGVNFSLFSRHATAVSLVLFEDPDTTEPIEEIILDPHK
NRTGDIWHCHVRGLAAGALYLYRVDGPYLPEKGFRFNSNKTLIDPYAKALTDLSNWDLTK
CMGYNPNMPDADLSFSYEDDAPYQPKCIVIDDTFNWEGDKPLNYPLRFSVLYETHVKGLT
MHPSSGVEHPGTYRGVIEKIPYFKELWITSLELMPIQEFNEQEIPRINPRTGEPLKNYWG
YSTVAFFAPKGSYSADRTPGAQVREFKEMVKALHRAGIEVILDIVFNHTAEGNELGPTFS
FRGIDNTIYYMLDENKRYYKNYSGCGNTLNCNHPVVRTFILDCLRYWVIEMHVDGFRFDL
GSILGRNQQGHLMENPPMLERIAEDPVLRNTKIIAEAWDAGGAYQVGWFPGGRWAEWNDR
YRDDVRKFWRGDAYEARHFATRLSGSSDLYLRDGRKPFHSINFVTSHDGFTLRDLVSYAE
KHNEENGEENRDGHGANFSCNYGFEGPTENPAIETIRFRQMRNFITTLMISLGTPMLLGG
DEIGRTQRGNNNAYCQDNEISWYDWKLLDKNRDFFRFVKEMLAFRIKHPAFLRPEFFTGK
DGDYNAIPDITWFDEHGNSPDWAKIDKRLAYRLDGSKADTFADRDDNDFYIMFNASKEGC
LFTIAEAPKGKKWFRVVDTSRPSPEDIVHPGLEQAISSQKDYYVHERTTVILMSKWI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactccaatatagcatagaaaacggtaaacccctacccctgggtacagaaatt
accagtacaggggttaatttttctcttttttctcgacatgctactgctgtatccttagta
ctttttgaagatccagatactactgagcctatagaagaaattattctggacccccataaa
aatcggaccggtgacatctggcactgtcatgtacggggacttgcagcaggagctttatat
ctctatcgagttgatggcccttacttaccagaaaagggctttcgttttaattcgaataaa
acgcttatcgatccttacgcaaaggcattaacggatttatcaaattgggatctgacaaaa
tgtatgggctataaccctaatatgcccgatgctgacctctccttttcgtatgaagatgat
gcaccttaccagccgaaatgtattgttatcgatgatacttttaactgggaaggggataag
ccccttaactatcccttaaggtttagcgtgttatatgaaacccatgtaaagggacttacc
atgcatccaagttctggagtggagcacccaggaacgtatcggggtgtcatagaaaaaata
ccctattttaaggaactttggataaccagtcttgaacttatgccaattcaggaattcaat
gagcaagaaatcccccgaataaatcctcggactggggaaccattaaaaaattattggggt
tattctacggtggccttttttgctccgaaaggatcctattctgccgaccggactcctggt
gcgcaggttcgagaatttaaagaaatggtaaaggccttacatcgggcaggtatcgaggtt
attcttgatatagtctttaatcatactgccgaaggaaatgaactggggccaaccttttca
tttcgggggatcgacaatacgatctattacatgcttgatgaaaataaacgatattataaa
aactactccggttgtggtaataccttaaactgtaatcacccggtggtacgtacctttatt
ttagattgtctgcgttattgggtaattgaaatgcatgtagatggattccgctttgatctt
ggttccatattaggtagaaaccagcagggacatcttatggagaacccacccatgcttgaa
cggattgcagaggatcctgtcctccgaaatacaaaaattatagcagaagcctgggatgca
ggaggtgcataccaggtaggatggtttcctggaggccgctgggcagaatggaatgatcgg
taccgagatgatgtacgaaaattctggcggggtgatgcttacgaggccaggcattttgcg
acccggctttccggtagttcggatctttatctccgggatggtagaaaacccttccattct
atcaattttgtgacaagtcatgatggatttactcttcgagatttggtgtcctatgcagaa
aagcataacgaagaaaatggagaagaaaaccgggatggtcatggggcaaatttcagttgc
aactatggttttgagggacctacagaaaatccagctattgaaacaatccgctttaggcag
atgcgtaactttataactacccttatgatttcgttgggtactccgatgcttttaggaggt
gatgaaataggtcggacccaacggggaaataacaatgcctactgtcaggacaatgagatt
tcctggtatgattggaaactgctcgataaaaatcgggattttttccgctttgtgaaggaa
atgcttgcattcagaataaaacacccggcatttttacgtcctgagttttttactggcaaa
gatggtgattataatgctatccctgatattacttggttcgatgaacatggtaatagcccc
gattgggcaaagattgataaacgtttagcatatcggctagatggtagtaaagcggacacc
tttgccgatcgagatgataatgatttttatatcatgttcaatgcgagcaaagaaggctgt
ctctttactattgcagaagcccccaaggggaaaaaatggttccgagtggtggacacaagt
cgcccatctccagaagatatagtacatcccgggcttgaacaggcaatctcatcccaaaaa
gattattatgttcatgaacgaacaacggttattctcatgtctaaatggatatag
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