Saccharomyces cerevisiae (budding yeast): YNL250W
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Entry
YNL250W CDS
T00005
Symbol
RAD50
Name
(RefSeq) MRX complex DNA-binding subunit
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03440
Homologous recombination
sce03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YNL250W (RAD50)
03450 Non-homologous end-joining
YNL250W (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sce03032
]
YNL250W (RAD50)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YNL250W (RAD50)
DNA replication proteins [BR:
sce03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
YNL250W (RAD50)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
YNL250W (RAD50)
BRCA1-C complex
YNL250W (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
YNL250W (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_15
AAA_22
AAA_21
AAA_29
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
855471
NCBI-ProteinID:
NP_014149
SGD:
S000005194
UniProt:
P12753
LinkDB
All DBs
Position
XIV:175410..179348
Genome browser
AA seq
1312 aa
AA seq
DB search
MSAIYKLSIQGIRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGDLPPNSK
GGVFIHDPKITGEKDIRAQVKLAFTSANGLNMIVTRNIQLLMKKTTTTFKTLEGQLVAIN
NSGDRSTLSTRSLELDAQVPLYLGVPKAILEYVIFCHQEDSLWPLSEPSNLKKKFDEIFQ
AMKFTKALDNLKSIKKDMSVDIKLLKQSVEHLKLDKDRSKAMKLNIHQLQTKIDQYNEEV
SEIESQLNEITEKSDKLFKSNQDFQKILSKVENLKNTKLSISDQVKRLSNSIDILDLSKP
DLQNLLANFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSNSLIRRQGELEAGKETYEK
NRNHLSSLKEAFQHKFQGLSNIENSDMAQVNHEMSQFKAFISQDLTDTIDQFAKDIQLKE
TNLSDLIKSITVDSQNLEYNKKDRSKLIHDSEELAEKLKSFKSLSTQDSLNHELENLKTY
KEKLQSWESENIIPKLNQKIEEKNNEMIILENQIEKFQDRIMKTNQQADLYAKLGLIKKS
INTKLDELQKITEKLQNDSRIRQVFPLTQEFQRADLEMDFQKLFINMQKNIAINNKKMHE
LDRRYTNALYNLNTIEKDLQDNQKSKEKVIQLLSENLPEDCTIDEYNDVLEETELSYKTA
LENLKMHQTTLEFNRKALEIAERDSCCYLCSRKFENESFKSKLLQELKTKTDANFEKTLK
DTVQNEKEYLHSLRLLEKHIITLNSINEKIDNSQKCLEKAKEETKTSKSKLDELEVDSTK
LKDEKELAESEIRPLIEKFTYLEKELKDLENSSKTISEELSIYNTSEDGIQTVDELRDQQ
RKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTVSEIESSLTQKQNIDDSIR
SKRENINDIDSRVKELEARIISLKNKKDEAQSVLDKVKNERDIQVRNKQKTVADINRLID
RFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNN
EEKNLKQNLELIELKSQLQHIESEISRLDVQNAEAERDKYQEESLRLRTRFEKLSSENAG
KLGEMKQLQNQIDSLTHQLRTDYKDIEKNYHKEWVELQTRSFVTDDIDVYSKALDSAIMK
YHGLKMQDINRIIDELWKRTYSGTDIDTIKIRSDEVSSTVKGKSYNYRVVMYKQDVELDM
RGRCSAGQKVLASIIIRLALSETFGANCGVIALDEPTTNLDEENIESLAKSLHNIINMRR
HQKNFQLIVITHDEKFLGHMNAAAFTDHFFKVKRDDRQKSQIEWVDINRVTY
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctatctataaattatctattcagggcatacggtcttttgactccaatgatagg
gaaactattgaatttggcaagcctctgactttaatagtcggcatgaatggttcaggtaaa
acgactatcatcgaatgtttaaagtacgctaccacaggtgatctaccgcccaacagcaag
ggaggagtattcattcatgacccgaagataactggtgaaaaggacattagagctcaggtc
aaactggcgtttacgagtgccaatggactcaatatgattgtcaccagaaatattcagttg
ctaatgaaaaagactactactacatttaagactttagaaggccagttggtcgctataaat
aatagtggtgaccgcagtactttgtccacccggtctctggaattagacgcacaagtaccc
ctgtatctgggagttccaaaagcgatcttggaatacgtgatattctgtcaccaagaagac
agcctgtggccactgagtgaaccatccaatcttaaaaagaagtttgatgaaattttccaa
gcgatgaaatttacaaaggctctagacaatttaaaatccataaagaaagacatgtccgtg
gatatcaagttattaaagcaatcagtagaacacttaaagttggataaagacagatcgaaa
gcaatgaagctcaatatccaccaattgcaaactaagatagatcagtataatgaagaagtg
tctgaaattgaatctcaattgaatgaaatcactgagaaatccgataaactgtttaaatct
aatcaagatttccaaaaaatactatccaaagtagagaacttgaaaaatacaaaactctca
attagtgatcaagtgaaaagattgtcaaactcaattgatattctcgatttatcgaagcca
gatttgcaaaacttattggcaaacttctctaaagtcttgatggataagaataatcagttg
agagatttggaaaccgatatttcaagtttgaaagaccgtcagtcatccttgcagagcctt
tctaattccctcatcaggcggcagggtgagttagaagctggtaaggagacatacgaaaag
aacagaaatcacctttcatcgctaaaagaagccttccaacataagttccaaggcctttca
aatattgaaaacagtgatatggctcaagtaaatcacgaaatgtcacagttcaaggctttc
atctctcaggatttaactgacactatagatcaatttgcaaaggatattcaactaaaggaa
acaaatttatccgacttgataaaatcaataaccgtcgattcacagaatttggaatataat
aaaaaggacagatctaaattaatccatgactctgaagagcttgctgagaaattgaaatca
tttaaaagtttgtctactcaagatagcctcaatcatgaactggaaaacttaaaaacatac
aaagaaaagctgcaatcttgggaaagtgagaatattataccaaaattgaaccagaaaata
gaagagaaaaataatgagatgattatcttagagaatcaaattgagaaatttcaagatcgc
ataatgaaaacgaatcaacaagcggacttatacgccaaactaggactaataaagaagtcc
attaatactaaattagacgagttacaaaagattacggaaaaattacagaatgattctaga
ataaggcaagtatttcccctcacccaggaatttcaaagagctgatttagaaatggatttt
cagaaattattcatcaatatgcaaaagaatatagcgatcaacaacaaaaagatgcacgaa
ttggatagaagatatacaaacgctttgtacaatttgaacaccattgaaaaggatttacag
gataatcagaagtcgaaagaaaaagtgatacaactactaagcgaaaacttaccagaggat
tgtactattgatgaatataatgatgtcctggaagaaacggagctctcctataagactgcg
ctggaaaacttgaaaatgcatcaaactactttagaatttaatagaaaagcattagagatc
gctgaacgtgacagctgctgttatttgtgttctagaaagtttgaaaatgaatcgtttaaa
agtaagttgttacaagaactaaaaacaaaaacagacgcaaattttgaaaaaactttgaaa
gacactgtccaaaacgaaaaggaatatcttcatagtttaaggctactggagaaacatatt
attacactaaattctataaatgaaaagattgataattcacagaagtgccttgaaaaagct
aaggaggaaacaaaaacttccaaatcaaaactagatgaattggaagtagattccacaaaa
ttgaaagatgagaaagagttagctgagtctgaaattcgtcctttgattgagaagtttact
tacttagaaaaggaacttaaggatcttgaaaacagttctaaaacgatatctgaggagcta
tcgatttataataccagtgaagatggtattcaaactgttgatgaattaagggaccaacaa
aggaagatgaatgattctttacgtgaactgaggaaaaccatttcagatttgcaaatggaa
aaagatgaaaaggtgagagaaaattcaagaatgattaacttgattaaagaaaaggaatta
acagtttctgaaattgaatcatctttaacacagaaacaaaatattgatgattctataagg
tcaaaaagggaaaacatcaacgatatcgattctagagtaaaggagttagaagcacgtatt
atttcattaaaaaacaaaaaggatgaagcgcaaagtgttctagacaaagtaaaaaatgaa
cgtgatattcaagtacgcaacaaacaaaaaaccgttgcagatattaatcggttaatagat
agatttcagaccatttataacgaagtggttgattttgaagctaagggcttcgatgaattg
caaacaacaataaaagaactagaattgaacaaagctcaaatgctggaactaaaggagcag
cttgatctcaagtcaaatgaagttaacgaagaaaagagaaaacttgctgactcaaataat
gaggagaaaaacttgaagcagaacttagaactaattgaattgaaatcacaacttcagcac
attgaatctgagataagtagattagacgttcaaaatgcagaagctgaaagggacaaatat
caagaggaatcactaagactaagaacaagatttgaaaagctgagctctgaaaacgcaggt
aaattaggtgaaatgaaacaattacagaatcaaatagattcattgactcatcaactgcgg
actgattacaaagatatcgagaaaaattaccataaagaatgggttgaattacagacaaga
tcctttgttactgacgacatagatgtctattcaaaagcattagatagtgctattatgaaa
tatcatggattgaaaatgcaagatataaacaggataattgatgaattatggaagcgtacg
tatagtggtactgatatagacaccatcaaaattagatcagatgaagttagtagtacagtt
aagggaaaatcatacaactatcgtgttgtaatgtacaagcaggatgttgaattggatatg
agaggacgatgttccgcgggtcaaaaagttcttgcatcgattattatcaggctagctcta
tctgaaacatttggcgcaaattgtggcgtaattgcactagacgaacctaccaccaattta
gatgaagaaaacatcgaaagtttagcaaaatctttacacaatataattaatatgagaaga
catcaaaagaatttccagctaatcgtgatcactcatgatgagaaatttttgggtcatatg
aatgcagcggcatttactgatcacttcttcaaagtcaagagagatgataggcaaaaatca
caaattgagtgggtcgatattaacagagtcacttattga
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integrated database retrieval system
