Streptomyces collinus: B446_31845
Help
Entry
B446_31845 CDS
T02787
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sci
Streptomyces collinus
Pathway
sci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B446_31845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sci03400
]
B446_31845
Enzymes [BR:
sci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B446_31845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B446_31845
DNA repair and recombination proteins [BR:
sci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B446_31845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
zf-RRN7
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGS73173
UniProt:
S5V0Q9
LinkDB
All DBs
Position
7374265..7375128
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALKDFLTEHLVGRRVVRVLPVAVSVLKTYEPPLTALEGGEVTAVDRYGKFLD
LATDGGPHLVTHLARAGWLQWRDRLPDGPPRPGKGPLALRVALETGEGFDLTEAGTQKRL
AVYVVRDPREVPGIARLGPDPLAADFDEERLAALLTDERRRIKGALRDQSLIAGVGNAYS
DEILHAAKMSPFKIAASLTPEEVHRLYEALRTTLTEAVERSRGLAAGRLKAEKKSGLRVH
GRTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgaagcgctgaaggacttcctcaccgagcacctggtcggc
cgccgggtggtgcgggtgctgccggtcgccgtcagcgtcctgaagacgtacgagcccccg
ctcaccgccctcgagggcggcgaggtcaccgccgtggaccggtacggcaagttcctcgac
ctcgcgacggacggcggaccgcacctggtcacccatctggcccgcgcgggctggctgcag
tggcgggaccggctgccggacggcccgccccgcccgggcaagggcccgctcgcgctgcgc
gtggcgctggagacgggcgagggcttcgacctcaccgaggccggcacccagaagcgcctc
gcggtgtacgtcgtccgggacccgcgggaggtgcccggcatcgcccgcctcggccccgac
ccgctcgccgcggacttcgacgaggaacggctcgccgccctgctgacggacgagcggcgc
cggatcaagggcgcgctgcgcgaccagagcctgatcgcgggggtgggcaacgcctacagc
gacgagatcctgcacgcggcgaagatgtccccgttcaagatcgccgcctcgctcaccccc
gaggaggtgcaccggctgtacgaggcgctgcgcaccaccctgaccgaggcggtcgagcgc
tcacgcggcctggcggcgggccgtctgaaggcggagaagaagagcggcctgcgcgtccac
ggacgcaccggcgagccgtgcccggtctgcggcgacaccatccgcgaggtctccttcagc
gactcctcgctccagtactgccccacctgccagaccggcggcaagcccctcgcggaccgc
cgcctgtcgcgcctgctcaagtag
DBGET
integrated database retrieval system
