KEGG   Sphingobium cloacae: SCLO_1003950
Entry
SCLO_1003950      CDS       T05301                                 
Name
(GenBank) channel protein TolC
  KO
K12340  outer membrane protein
Organism
sclo  Sphingobium cloacae
Pathway
sclo01501  beta-Lactam resistance
sclo01503  Cationic antimicrobial peptide (CAMP) resistance
sclo02020  Two-component system
sclo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sclo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SCLO_1003950
  09132 Signal transduction
   02020 Two-component system
    SCLO_1003950
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SCLO_1003950
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SCLO_1003950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sclo02000]
    SCLO_1003950
   02044 Secretion system [BR:sclo02044]
    SCLO_1003950
   01504 Antimicrobial resistance genes [BR:sclo01504]
    SCLO_1003950
Transporters [BR:sclo02000]
 Other transporters
  Pores ion channels [TC:1]
   SCLO_1003950
Secretion system [BR:sclo02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   SCLO_1003950
  RTX toxin transporter
   SCLO_1003950
  Multiple protein transporter
   SCLO_1003950
  RaxAB-RaxC type I secretion system protein
   SCLO_1003950
Antimicrobial resistance genes [BR:sclo01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    SCLO_1003950
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    SCLO_1003950
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: BAV63435
UniProt: A0A1E1EYU3
LinkDB
Position
SCLO_1:complement(443954..445219)
AA seq 421 aa
MTLRRTIPLPLLAGLLASVAMPAQATTLEEAIAAAVNHAPEIEAAGADADAADARIREAR
GQGLPTATLSGTIGYGRLDPQGFFGLPAANVTPRAAQLTIEQPLFMGGRVSAGIAQAKAG
SEAARAGETMTRSQIVVATVQAYGDVLTTHRMIALYEQMVGQMEEIQRQARLRFKAGESP
STDVAQAAARLAEAQAALEGARGFAISADARFTNLTGLAPQDLQPIPASPVLPASLDEAL
DSARGNNPALAQAEAALDAAQAGARGARAERLPTIGAFAEGSTVRDQFFPDYRSDAATVG
VRARWQIFAGGRVSAKITESDSAVRAADARMRAARAAVDEQTISAFSGVRSAALVEAAAS
QQALAAGQARDSVRHEVRVGMKPQLDLLDAEREATAAAVSEARARSDRIVAAYRLLALLG
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacgctcaggcggacgatccccctccccctgctcgccggcctgctggcgagtgtcgcc
atgcccgcgcaggcaacgacgcttgaagaagccattgcggccgccgtgaaccacgcgccg
gaaatcgaggcggcgggggccgatgccgatgcggccgacgcccggatcagggaagcacgc
ggccagggtctgccaaccgcgacgctgagcgggacgatcggctatggacgactcgatccg
cagggtttcttcgggcttccggcggccaacgtcacgccgcgcgcggcgcagctcactatc
gaacagcccctctttatgggcggcagggtcagcgccgggatcgcacaggcgaaagcgggc
agcgaagcagcacgcgccggtgaaacgatgacccgcagccagatcgttgtcgcgacggtc
caagcctatggcgacgtgctgaccacgcaccgaatgatagcgctctatgaacagatggtc
ggccagatggaggagatccagcgccaggcccggctccgcttcaaggcaggcgaaagcccc
agcaccgatgttgcgcaggcggcggcgcgccttgccgaagcacaggcagcccttgaaggc
gcgcgcggctttgccatctcggccgatgcgcgattcaccaacctcactggccttgccccg
caggatctccagcccattccggcaagtccggtcctgcctgcctcgctcgatgaagcgctc
gacagcgcccgcgggaacaacccggcgctggcgcaagccgaagcggcattggatgccgcc
caggccggcgcgcggggcgcgcgggccgaacgcctgcccacgatcggcgccttcgccgaa
ggttcgacggtgcgtgaccagttctttcccgattatcgctccgatgccgccacggtcggc
gtgcgggcgcgctggcagatattcgcgggcgggcgagtctcagccaagattaccgaatcc
gatagtgcggtcagggccgccgatgcgcgtatgcgcgccgcacgcgccgccgtcgatgaa
cagacgatcagcgccttttccggggtgcgctcggccgccctggtcgaagcggctgcttcc
cagcaagcccttgccgccggacaggcgcgcgacagcgtgcgccacgaggttcgcgtgggg
atgaagccccagctcgatctgctcgatgccgaacgcgaggcaaccgccgcagcggtcagc
gaagctcgcgcgcgaagcgatcgcatcgtcgcggcttaccgactgcttgcccttctcgga
cgctga

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