Sphingobium cloacae: SCLO_1010320
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Entry
SCLO_1010320 CDS
T05301
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sclo
Sphingobium cloacae
Pathway
sclo00300
Lysine biosynthesis
sclo00470
D-Amino acid metabolism
sclo01100
Metabolic pathways
sclo01110
Biosynthesis of secondary metabolites
sclo01120
Microbial metabolism in diverse environments
sclo01230
Biosynthesis of amino acids
Module
sclo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCLO_1010320
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCLO_1010320
Enzymes [BR:
sclo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SCLO_1010320
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAV64072
UniProt:
A0A1E1F0U3
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All DBs
Position
SCLO_1:complement(1188012..1189235)
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AA seq
407 aa
AA seq
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MGPIPPHFSAEDGMLLIGGCGAASLVDEAGDTPLFVYDMAIVEAQVRALREAMPDALSIH
YAMKANPYPPLLARMAGLVDGFDVASGGELALALEAGMDAAHISFAGPGKRDDELTAAIR
NGATLNLESEGEARRALAIGDRLGIRPKLAVRVNPDFDLKGSGMRMGGGAKPFGIDADRA
AALARTVMGAGADWRGWHIFAGSQALDRQAIIDMQAATLILAARLSEEAGAVPPLVNLGG
GFGLPYFPGDQRLDIRPVGAALDNALEARADILRDSAFAIELGRWLVGEAGVYLTRVVDV
KQSMGETFVVVDGGLHHQLAASGNFGTVVRRNYPIAVANRFGAEPNPEAVTVVGCLCTPI
DRLGDKVALPPVQEGDLIAVFLAGAYGASASPAAFLGHPCAGQLLIG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgatcccgccgcatttttccgccgaggacggcatgttgctgatcggcggctgc
ggcgcggcgagccttgtcgacgaagcgggcgacacgccgctcttcgtctatgacatggcg
atcgtggaagcgcaggtccgcgccttgcgggaggcgatgcccgatgcgctctctatccat
tacgcgatgaaggccaatccttatccgccgctgctagcgcgcatggcggggctggtcgat
ggcttcgatgtggcgtcgggcggagaacttgcgcttgcgctggaggcgggcatggacgcg
gcgcatatcagctttgcagggccgggaaagcgcgatgatgaactgacggcggcgattcgg
aatggcgcgacgctcaatctggagtcggagggggaggcgcgtcgcgcgctcgccatcggc
gaccgtctggggatcaggccgaagctcgcggtccgcgtgaaccccgatttcgatctcaag
ggatcggggatgcggatgggcggcggggccaagcccttcggcatcgatgccgaccgcgcc
gccgctctcgctcgcaccgtgatgggggcgggcgcggactggcgcggctggcacatcttc
gcaggaagccaggcgctcgaccgccaagcgatcatcgacatgcaggccgcgaccctgatc
ctcgccgcgcgcctgtcggaagaagcgggcgccgtgccgccgctcgtcaatctgggcggc
ggtttcggcctgccctatttccccggcgaccagcggctcgacatccgccccgtcggcgcg
gcgctggacaatgcgctggaagcgcgcgccgacatcctgcgcgacagcgccttcgccatc
gagctgggccgctggctggtgggggaggcgggcgtttatctgacccgcgtggtcgacgtg
aagcagagcatgggcgaaactttcgttgtcgtggacgggggcctgcatcatcaactcgcg
gccagcggcaatttcggcaccgtcgttcgccgcaactatcccatcgcggtcgcgaatcgt
ttcggtgcggaaccgaatccggaggccgtaacggtggtcggctgcctctgcactcccatc
gaccggctgggcgacaaggtggccctgcccccggtgcaggaaggcgatctgatcgcggtc
ttcctggccggagcctatggcgcctcggccagcccggccgcctttctgggccatccctgt
gcgggacagcttctgatcggctga
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