Sphingobium cloacae: SCLO_1010950
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Entry
SCLO_1010950 CDS
T05301
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sclo
Sphingobium cloacae
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sclo01002
]
SCLO_1010950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
SCLO_1010950
Peptidases and inhibitors [BR:
sclo01002
]
Cysteine peptidases
Family C82
SCLO_1010950
Peptidoglycan biosynthesis and degradation proteins [BR:
sclo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SCLO_1010950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BAV64135
UniProt:
A0A1E1F0U4
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Position
SCLO_1:complement(1258820..1260436)
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AA seq
538 aa
AA seq
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MPAAAAARAFAAGRTRLITQSFRARHIRRAPSLASILIAGLMAGLGAAPVAHAQDAAVQE
APARSSVAAEIRAQVGGKLRDFYGPRGFWPIWVEKNAIGPQADALLDLIDGAEADGLKPG
SYDPRGLRKAIGDANASGDPRALASAELALSKSFAKLVADMRKPSKAVKMRYLDPEVEPR
DPGPVDILRAAAVTSSFADYVEKAGWMSPFYMQLRKARAGYAKTWADLPDVGVPTGLKLK
AGAKGPGVAALRERLGLTPGGSYDKALAAKVKAFQGDHGLTPDGIAGTQTVTALNRGPRY
YLRALALNMERTRLLPGPWVRHVVVDAASARLWYYGEGKLDGTMKVVVGAKESQTPMMAG
MIRYATLNPYWNVPSDLVERKIAPKILDGASLQKMNYEALSDWSANPQKLRQSSIDWQAV
ADGRQELRVRELPGRGNSMGRMKFMFPNDLGIYLHDTPSRDLFAKPARQFSNGCVRLEDA
PRLGKWFFGKALATDSDKPEQHRPLPQAVPVYLTYLTAVPAKEGVSFLPDVYERDGGS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgccggccgccgccgccgcccgtgccttcgcggcggggagaacgcggctgatcacccag
tctttccgggcgcggcacatccgccgcgccccttcccttgcttccatcctcattgccgga
ctgatggcgggccttggcgccgcgccggtcgcccatgcgcaggacgccgccgttcaagaa
gcgcccgcgcgatccagcgtggcggcggaaatccgcgcgcaggtgggtggcaagctgcgc
gatttctacgggccgcgcggtttctggccgatctgggtcgaaaagaacgccatcgggccg
caggctgacgccttgctggacctgatcgacggcgcggaagccgatgggctgaaacccggc
agctacgaccccagggggttgcgcaaggcgatcggggacgcgaacgccagcggcgatccc
agggcgctggcgagcgcggaactggcgctctcgaagagcttcgcgaagctggtggccgac
atgcgcaagccgtccaaggcggtgaagatgcgctacctcgatccggaagtggagccgcgc
gaccccggcccggtggacatattgcgcgcggcggcggtgacatcctccttcgcggattat
gtggagaaggcgggctggatgagccccttctacatgcagttgcgcaaggcgcgggcgggc
tatgccaagacatgggcggacctgcccgatgtgggggtgcccacgggcctcaagctcaaa
gccggggcgaaggggccgggcgtggccgcgctgcgcgagcggctggggctgacgccgggc
ggaagctatgacaaggcgctggccgcgaaggtgaaggcgttccagggcgaccatggcctg
acgcccgacggcatcgcgggcacgcagacggtgacggcgctcaatcgcgggccgcgatat
tatctgcgcgcgctggcgctcaacatggagcggacgcggctgctgcccggcccatgggtg
cggcatgtggtggtggacgcggcgtcggcgcggctctggtattatggcgagggcaagctg
gacggcacgatgaaggtcgtggtcggcgcgaaggaaagccagacgccgatgatggcgggc
atgatccgctatgcgacgctgaacccttattggaacgtgccgtccgatctggtcgaacgg
aagatcgcgccgaagatattggatggcgcttcgctccagaagatgaattatgaggcgctg
tcggactggagcgccaacccgcagaagctcaggcagagcagcatcgactggcaggcggtg
gcggacgggcggcaggaattgcgcgtgcgcgaactgccggggcggggcaattccatgggg
cggatgaagttcatgttccccaacgacctgggcatctacctgcacgatacgccttcgcgc
gacctgttcgccaagcccgcgcggcagttcagcaatggctgcgtccggctggaggatgcg
ccgaggctgggcaaatggttcttcggcaaggcgctggcgacggattcggacaagccggaa
cagcatcggccgctgccgcaggcggtgccggtctacctcacctatctgaccgcggtgccg
gccaaggaaggggtgagcttcctgcccgacgtctatgagcgggacggcggcagctag
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