Solitalea canadensis: Solca_1808
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Entry
Solca_1808 CDS
T02084
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scn
Solitalea canadensis
Pathway
scn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Solca_1808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scn03019
]
Solca_1808
03016 Transfer RNA biogenesis [BR:
scn03016
]
Solca_1808
Enzymes [BR:
scn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Solca_1808
Messenger RNA biogenesis [BR:
scn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Solca_1808
Transfer RNA biogenesis [BR:
scn03016
]
Prokaryotic type
tRNA degradation factors
Solca_1808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFD06870
UniProt:
H8KVW7
LinkDB
All DBs
Position
2157501..2159669
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AA seq
722 aa
AA seq
DB search
MSQIGITKTFDIGDGRLISIETGKLAKQADGSVVVKMGNTMLLATVVSAKEAKPGTDFLP
LSVDYQEKYAAAGRIPGGFLRREAKLSDYEVLISRLVDRALRPLFPDDYHADTQVMISLI
SADKDIAPDALAALAASAALTISDIPFNGPISEVRVARIDGKYVVNPGIKELEQADMDIM
LAGSAKDIVMMEGEMKECSEQDMIEAIKVGHEAIKVQINAQLELRELTGNKPKREYNHEE
NDADLKNRIREELYAAIYNVAKSGGNKDERGEAFKAVRDAFIEKVTLEKGEEGIDDVTLM
LIKRYYHDIEKEAMRNMILNEGIRLDGRTVTQIRPIWSEVNYLPSAHGSAVFTRGETQSL
TTVTLGAKDDEQMIDGALFFGYNKFLLHYNFPGFSTGEVRPNRGPGRREIGHGNLAMRSL
KQVLPIEGENPYTIRVVSDILESNGSSSMATVCAGALALMDAGIKLKAPVSGIAMGLISE
GDKYAILSDILGDEDHLGDMDFKVTGTTKGITGCQMDIKIDGLSYETLTQALEQARQGRL
HILGEMAKTLSEPREDYKPHAPRIVEILIPREFIGAVIGPGGKVIQEMQRETGADINIEE
VGEFGKVQIFGTEKESVDKAMARIKGITTVPEIGEVYEGTVKNIQPFGAFVEILPGKDGL
LHISEIDWKRFETMDGVLEIGETIKVKLLDIDKKTGKLKLSRKVLLPRPERPAQEKKEEN
KQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaattggaattactaaaacgtttgatatcggcgatggaagactgatatcaatc
gaaaccggaaagctggcgaaacaagctgatggtagcgtagtagtaaaaatgggaaacacc
atgttactagctactgtcgtttcggcaaaagaagctaaaccgggaactgactttttaccc
ctgtctgtagattatcaagaaaaatatgccgctgccggacgtattcctggtggcttttta
cgtcgtgaagcaaaactttctgactatgaagtactaatcagccgtttggttgaccgtgca
cttcgtcctttattccctgatgattatcacgctgatacacaagtaatgatcagcttaatt
tctgctgataaagatatcgctcctgatgcattagctgctttagctgcatctgctgcttta
acgatcagtgatattcctttcaatggccctatctctgaagtacgtgttgcacgtattgac
ggtaaatatgtggttaaccctggaattaaagaacttgaacaagctgatatggatatcatg
cttgctggttctgctaaagacatcgtaatgatggaaggggagatgaaagaatgttcagaa
caagatatgattgaggccattaaagttggtcacgaggctatcaaagttcagatcaatgca
cagttggaattacgcgaattgaccggaaacaaaccaaaacgcgaatacaaccacgaagaa
aatgatgctgatcttaaaaaccgtatcagagaagaactttacgcagcgatttacaatgtt
gctaaatctggtggaaacaaagatgagcgtggcgaagctttcaaagctgttcgtgatgca
tttattgagaaagtaacgttagaaaaaggtgaagaaggtattgatgatgtaacgttaatg
cttattaaacgttactaccacgatatcgaaaaagaggcaatgcgtaacatgatcttaaac
gaaggtattcgtttagatggtcgtactgttacccaaattcgtccaatctggtcggaagtt
aactatttaccttctgcacatggttcggcagtatttactcgtggtgaaactcaatcatta
actactgttaccttaggtgcaaaagatgatgagcaaatgatcgacggagcattattcttc
ggatataacaaattcttattgcactataacttcccaggtttctcaacaggtgaagttcgc
cctaaccgcggtcctggtcgtcgtgaaattggtcacggtaaccttgcaatgcgttcattg
aaacaagttttaccaatcgaaggcgaaaatccatataccatccgtgttgtttctgatatt
ttggagtcaaacggttcttcatcaatggctaccgtttgtgcgggtgcattagcattgatg
gatgcaggtattaaacttaaagctcctgtttcaggtattgcgatgggtttaatttctgaa
ggagataaatatgccattctttcagacatcttaggtgatgaagatcatttaggagatatg
gactttaaagttaccggaactactaaaggtattaccggttgccaaatggacattaagatt
gatggtttatcatacgaaactttaacgcaagcattagagcaggctcgtcagggacgttta
cacatccttggtgaaatggcgaaaacactttctgaaccacgtgaagattacaaaccacat
gcaccacgcattgttgagatattaattcctcgtgaatttatcggtgcagtaattggccca
ggtggtaaagttatccaggaaatgcaacgcgaaaccggagcagatatcaatatcgaagaa
gttggtgaatttggtaaagttcaaatctttggtacagagaaagaaagtgtagacaaagca
atggcaaggatcaaaggtattactactgttcctgaaattggtgaagtttacgaaggtaca
gttaaaaacattcaaccttttggtgcgtttgtagagattttgcctggtaaagatggttta
ttacacatttctgaaatcgactggaagcgttttgagacaatggatggggttttagaaatt
ggcgagacaatcaaagttaaattacttgatatcgataagaaaacaggtaaattgaaactt
tcacgcaaagtgttgcttcctcgtccggagcgtcctgcacaagaaaagaaagaagaaaac
aaacaataa
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