Salinivibrio costicola: HBA18_00140
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Entry
HBA18_00140 CDS
T06511
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
scot
Salinivibrio costicola
Pathway
scot00730
Thiamine metabolism
scot01100
Metabolic pathways
scot01240
Biosynthesis of cofactors
Module
scot_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HBA18_00140 (thiC)
Enzymes [BR:
scot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HBA18_00140 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QIR04920
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Position
1:28963..30939
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AA seq
658 aa
AA seq
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MSTRKQARLEAKSFIDSLSAQTYPNSEKVYVEGSRPDIRVGMREIHLSPTFVGGSKDNPQ
YEANESIRVYDTSGPYTDPQSAIDIYQGLAPVRKAWIDERADTEFLDAVSSDYAKTRLSD
ETLDDLRFSALPSIRRAKPNQCVTQLHYARQGIITPEMEFIAIRENMGRQQYREEQLNRQ
HPGESFGAHLPSNITPEFVRQEVAEGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSA
VSSSIEEETEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GIAEDLTWEVMRDTLIEQAEQGVDYFTIHAGVRLHYVPMTANRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAAYDVSLSLGDGLRPGSVADANDEAQFSELRTLGELTKVAW
EYDVQVMIEGPGHVPMHMIKENMDEQLTHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLCAHAADLAKGHPGAQVRDNAISKAR
FEFRWEDQFNLALDPVTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAKEN
GYAAAGEAIDVTMLEDPLAGMQQKSQEFREKGSELYLQKSHHSSPQGAEVADSDKVES
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacccgtaaacaggcccgccttgaggccaaatcttttatcgattccctctctgcg
caaacctaccctaactcggaaaaagtctatgtcgagggatcgcgacccgatattcgcgta
ggcatgcgcgaaatccacctttctcctacttttgtaggcgggagtaaagataatccgcag
tatgaagccaatgaatccattcgggtttatgacacatcagggccttataccgacccacag
agtgctatcgatatttaccaaggtttagccccagtacgcaaagcctggattgatgaacgt
gccgatacagagttccttgatgcagtgagctcagattatgcaaagactcgccttagtgat
gaaaccttggatgatcttcgctttagtgccttaccgtctatccgtcgggcgaaacctaac
cagtgtgtgacccaacttcactacgcacgccaaggcattatcaccccagagatggaattt
attgctattcgggaaaatatgggtcgccaacagtatcgtgaagagcaactaaaccgccag
catcctggggaaagctttggtgctcacttgccatcaaacatcactcccgaatttgtgcgc
caagaggtcgctgaagggcgtgcgattattcctgccaacattaaccacccagaagcggag
ccgatgatcattgggcgtaactttctggtgaaagtgaatgccaatattggtaactcggcg
gtgagctcctccattgaagaagaaaccgaaaagttggtgtgggcgacccgttggggcgcg
gatacggtgatggatttatcgaccggacgcaatatccacgaaactcgcgagtggatttta
cgtaatagcccagtcccgattggcactgtgcccatgtatcaggcgcttgagaaagtgaat
ggcattgccgaagacctgacttgggaagtgatgcgcgataccttgatagagcaagccgag
caaggagtcgattattttaccattcacgctggagtgcgtttgcactatgtgcccatgacc
gccaatcgcgtgactgggattgtctcgcgtggtgggtcgattatcgccaaatggtgcttg
gcgcatcatcaagaaagcttcctctatacccattttcgtgaaatctgcgagatttgtgcc
gcctatgatgtatcgctgtcactaggcgatgggctacgtcccggctcagtggctgacgcg
aacgacgaagcgcaattcagtgagctacgtactctgggcgagcttaccaaggtggcatgg
gaatacgatgtgcaggtgatgattgaaggccccggccatgtgcctatgcacatgatcaaa
gagaacatggacgagcagctcacccattgccatgaagcgcctttttatactttaggcccg
ctgactaccgatatcgcgcctggttacgaccacatcacctccgggattggtgcggcgatg
attggctggtttgggtgtgcgatgctttgctatgtcacgcctaaagaacatctgggtctg
cccaacaaagaggatgttaaaactgggcttatcacctacaagttgtgcgcacatgccgcc
gacttagccaaaggacatccgggcgcgcaggtgcgagataacgccatttccaaagcgcgc
tttgaattccgctgggaagatcagttcaaccttgctttagatccggtgacggcgcgtgct
tatcacgatgaaacactgcctcaagagtcgggcaaggtcgcgcatttttgctccatgtgt
gggccgaaattctgctccatgaaaatcagccaagaagtccgagattatgccaaagaaaat
ggctatgccgccgcgggcgaagcgattgatgtcactatgctggaagacccgttagcaggc
atgcagcaaaaatcgcaagagtttcgagagaagggcagtgagctctacctgcaaaaatcc
catcattcgtcaccacaaggcgctgaggtagcggacagcgataaggtggaatcatga
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