Streptococcus parasanguinis ATCC 15912: HMPREF0833_11612
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Entry
HMPREF0833_11612 CDS
T01545
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scp
Streptococcus parasanguinis ATCC 15912
Pathway
scp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0833_11612 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scp03021
]
HMPREF0833_11612 (rpoA)
03400 DNA repair and recombination proteins [BR:
scp03400
]
HMPREF0833_11612 (rpoA)
Enzymes [BR:
scp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0833_11612 (rpoA)
Transcription machinery [BR:
scp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0833_11612 (rpoA)
DNA repair and recombination proteins [BR:
scp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0833_11612 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Corazonin
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEH56643
UniProt:
F8DGN3
LinkDB
All DBs
Position
1724327..1725265
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKIDENKDYGVFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVL
HEFDTVPGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIVN
PDHYLFTIGEGASLKATLTVNSGRGYVPADQNKKDDAPVGTLAVDSIYTPVTKVNYQVEP
ARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTNLTEIAIATDVMKEVDT
TSDDRILERTIEELDLSVRSYNCLKRAGINTVYDLTEKSEAEMMKVRNLGRKSLEEVKIK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaatataacaaaaattgatgaaaacaaagattatggcgtg
tttgtcgtagaaccacttgaacgtggttatggtacaacacttggaaactcacttcgtcgt
gtacttctggcttcacttccaggtgcagctgtcacttcaatcaacattgaaggtgtactc
cacgaatttgataccgttccaggagtccgtgaagacgttatgcaaattattcttaacgtt
aaagggatcgccgttaaatcttacgtccaagacgaaaagattattgaacttgatgtagaa
ggacctgcagaagtaactgctggagatattcttactgatagtgacatcgaaattgtaaac
cctgatcattatctatttacaatcggagaaggagcatctttgaaagcaacgcttactgta
aacagtggacgtggctatgttccagctgatcaaaacaaaaaagatgatgcaccagtggga
acacttgctgtagattcaatctatacgccagtgacaaaagtcaattaccaagttgaacca
gcacgcgttggtagcaacgatggatttgacaagctaacccttgaaattttgacaaatggg
acaattattccagaagatgccttaggtttgtctgcccgtattttgacagaacacctaaat
ctattcacaaacttaactgaaattgctattgcgacagatgttatgaaggaagtagataca
acttctgatgatcgcattttagaacgtacgatcgaagaattagatctttcagttcgttca
tataactgtttgaaacgtgctggcattaatactgtttacgatttgactgaaaaatcagaa
gcagaaatgatgaaagttcgtaacttgggacgtaagagtctagaagaagttaaaatcaaa
cttgccgacttaggccttgggttaaaaaacgataaatag
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