Spiroplasma chrysopicola: SCHRY_v1c01130
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Entry
SCHRY_v1c01130 CDS
T02676
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
scr
Spiroplasma chrysopicola
Pathway
scr03030
DNA replication
scr03430
Mismatch repair
scr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHRY_v1c01130 (holA)
03430 Mismatch repair
SCHRY_v1c01130 (holA)
03440 Homologous recombination
SCHRY_v1c01130 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scr03032
]
SCHRY_v1c01130 (holA)
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c01130 (holA)
Enzymes [BR:
scr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCHRY_v1c01130 (holA)
DNA replication proteins [BR:
scr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCHRY_v1c01130 (holA)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCHRY_v1c01130 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-GeneID:
16151575
NCBI-ProteinID:
AGM24700
UniProt:
R4UF12
LinkDB
All DBs
Position
132141..133109
Genome browser
AA seq
322 aa
AA seq
DB search
MFLIYGEDAYLINLQKEKILKKININEVYSLDEYSYLEDSLLDILNDANTIPMFAEKRII
LVNDSYFLTEEKIKAKIDNKDYLPKLIEYLENPNPNTFIIFICPVNNISNRLKITKKMLE
LTSVLKAINLSYNELTRFIANYIQQNNGTISDQLINSLVEYLPNNLYIIKNELDKLLLIS
NNITKELIEHNLTKYLDTDIFKVVNYLLANDLNNFLSNYHYLKARGLSDIALIALITNNV
ILTRDIIVLSMLKKTPSEIANLLKVHPFRVKKISEILSNFSLKKANDLILNLFSIDYNIK
KGIINREIDSDLYFIKLFNINR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaatctatggggaagatgcatatttaataaatttgcaaaaagaaaaaatttta
aagaaaattaatattaatgaagtatatagtcttgatgaatacagttatttagaagattcg
ctgttagacattttaaatgatgctaatacaattccaatgtttgccgaaaagcggattatt
ttagttaatgatagttattttttaaccgaagaaaaaattaaggcaaaaattgacaataaa
gactacttaccaaaattaattgaatatctagaaaatcctaatcctaatacctttatcatt
tttatttgcccagtaaataatattagtaatcggttaaaaattacaaaaaaaatgttggaa
ttaactagtgttttaaaagcaattaacttatcgtataatgaattaacaagatttattgct
aattatattcagcaaaacaatggtactattagcgatcaattaattaatagtttagttgaa
tatctgccaaataatttgtatattattaagaatgaacttgataagttattactaattagc
aataacattaccaaagaattaattgagcataatttaacaaaataccttgatacagatatt
tttaaagttgtaaattatttattagccaatgatttaaataactttttaagtaattatcat
tatttaaaggcacgaggattaagcgatattgccttgattgctttaattacaaataatgtt
attttaacccgtgacatcattgtcttatctatgttaaaaaaaacaccatccgaaattgca
aatttattaaaagttcacccatttcgggttaaaaaaatatcagaaattctttctaatttc
agtttgaaaaaggccaatgatttaatattaaatttattttcaattgattataatattaaa
aaaggtataattaacagagaaatagatagtgatttatattttattaaattatttaatatt
aatcgttaa
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