Stanieria cyanosphaera: Sta7437_1688
Help
Entry
Sta7437_1688 CDS
T02406
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
scs
Stanieria cyanosphaera
Pathway
scs00100
Steroid biosynthesis
scs00909
Sesquiterpenoid and triterpenoid biosynthesis
scs01100
Metabolic pathways
scs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Sta7437_1688
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Sta7437_1688
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scs01006
]
Sta7437_1688
Enzymes [BR:
scs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Sta7437_1688
Prenyltransferases [BR:
scs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Sta7437_1688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF1289
Motif
Other DBs
NCBI-ProteinID:
AFZ35250
UniProt:
K9XRL0
LinkDB
All DBs
Position
complement(1897349..1898173)
Genome browser
AA seq
274 aa
AA seq
DB search
MTVLTNALEILKQTSRTFYIPIVRLPGQLQAAVASGYLCMRAIDEIEDHPQLDNSTKAQL
LRQISLQLQQIVNHSSAGTIAQSLSSYQNILPEVTLRLDEWASLAPETIAPRIWDATAAM
ADRMAYWAEKNWQIETEVELDRYTFSVAGAVGLLLSDLWAWYDNTQTNRTYAIGFGRGLQ
AVNIIRNHSEDLTRGVNFLPQGWNKEDLQVYARRNLHLADLYTKQLKPGPALDFCQIPLV
LAHGTLDAIAMGKEKLSRSDVLTIVQQFKQIKSA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcttaccaatgctttagaaattctcaagcaaaccagtcggactttctatatc
cccattgttcgtttaccgggacagttgcaagcagcagtagcatcaggctatctatgtatg
cgggcaattgatgaaatcgaagatcatccccaattagataactcaaccaaagcccaactt
ttacgtcaaattagtcttcaactccagcaaatcgttaatcattcttctgctggtactatt
gctcagagcttatctagttatcaaaatattctgcccgaggtaacacttcgtcttgacgaa
tgggcaagtctagcgccagaaactatcgcacctcgaatttgggatgctactgctgctatg
gcggatcgcatggcttattgggcagaaaaaaattggcagattgaaacagaagtagagcta
gaccgttatacttttagtgtagctggtgcagtcggattgttactatcagatttgtgggct
tggtatgataacacccaaactaatcgtacttacgcaattgggtttggtcgcggtttacaa
gcggttaatattattcgtaatcatagtgaagatctaaccagaggagtcaattttctaccc
caaggttggaataaggaagatttgcaagtttatgctcgtcggaacttacatttagccgat
ctatatactaaacaattaaaacctggtcctgccttagatttttgtcaaattcctttagtt
ttagcccacggaactttagatgcgatcgcaatgggcaaagaaaaacttagtcgtagcgat
gttctgaccatagttcaacaatttaagcaaattaaatcagcctaa
DBGET
integrated database retrieval system
