KEGG   Streptomyces cattleya NRRL 8057 = DSM 46488: SCAT_0666Help
Entry
SCAT_0666         CDS       T01646                                 

Gene name
lig
Definition
(GenBank) putative DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sct  Streptomyces cattleya NRRL 8057 = DSM 46488
Pathway
sct03030  DNA replication
sct03410  Base excision repair
sct03420  Nucleotide excision repair
sct03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SCAT_0666 (lig)
   03410 Base excision repair
    SCAT_0666 (lig)
   03420 Nucleotide excision repair
    SCAT_0666 (lig)
   03430 Mismatch repair
    SCAT_0666 (lig)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sct03032]
    SCAT_0666 (lig)
   03400 DNA repair and recombination proteins [BR:sct03400]
    SCAT_0666 (lig)
Enzymes [BR:sct01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SCAT_0666 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     SCAT_0666 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SCAT_0666 (lig)
DNA replication proteins [BR:sct03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SCAT_0666 (lig)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SCAT_0666 (lig)
DNA repair and recombination proteins [BR:sct03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SCAT_0666 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     SCAT_0666 (lig)
   MMR (mismatch exicision repair)
    Other MMR factors
     SCAT_0666 (lig)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase
Motif
Other DBs
NCBI-ProteinID: CCB73404
LinkDB All DBs
Position
complement(749944..751497)
Genome map
AA seq 517 aa AA seqDB search
MRFVEVARTSREVAATSARSRKISLLSGLFRDAEPSEAPVVITYLAGRLPQRRIGVGWST
LSEPVPAAEEPRLAVLEVHLALGRIASVVGQGAQHERRRLVHELLAAATEEEQRFLVALI
AGELRQGALDALAVEGLAAAVGVGAGDVRRAVMLRGSLGAVAEALLARGAEALTDFRLEV
GRPVLPMLAHTARDVAEALDRLGPCAVEEKLDGIRVQVHRDGDLVRVYTRSLDEITDRLP
EVVAEARALPGRQAVLDGEVIALGEDGRPRAFQETAGRVGSRLDVASAQAALPVFPVFFD
LLYVDGRDLLELSTADRHAELAALVPVPLRVRRIVAEDPGSPADRAAAEEFTEATLARGH
EGVVLKALDAPYSAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARRRNG
TFAMLGKTFKGLTDAMLEWQTERLQELTVHDERWGVVVRPELVVEVAFDGVQRSPRYPEG
VTLRFARVLRYREDKTPDQADTVETVLGLRAPAAPAP
NT seq 1554 nt NT seq  +upstreamnt  +downstreamnt
atgcggttcgtcgaggtcgctcggacgtcccgtgaggtcgcggctacgagtgcgcgctcg
cggaagatttcgttgttgtcgggtcttttccgggatgcggagccgtccgaggcgccggtg
gtgatcacgtatttggccgggcggttgccgcagcggcggatcggggtgggctggagcacg
ttgtcggaaccggtgccggcggcggaggagccgcggctcgcggtgctggaggtccacctg
gcgttggggcggatcgcctcggtcgtcgggcagggggcccagcacgagcgtcggcgcctg
gtgcacgagttgctggccgcggcgaccgaggaggagcagcggttcctcgtcgcgttgatc
gccggggagttgcggcagggcgcgctcgacgcgctcgccgtcgaagggctcgccgcggcc
gtcggggtgggggcgggcgatgtgcggcgcgcggtgatgctgcgcggttcgctcggcgcg
gtggccgaggcgttgctggcccggggcgccgaggcgctcaccgatttccggctggaggtc
ggccgcccggtgctgccgatgctcgcgcacaccgcccgggacgtcgccgaggccctcgac
cggctcggcccctgcgcggtggaggagaaactcgacggcatccgcgtccaggtgcaccgc
gacggggacctcgtacgcgtctacacccgttccctggacgagatcaccgaccggctgccg
gaagtggtcgccgaggcccgggcgttgccggggcggcaggccgtgctcgacggcgaggtg
atcgcgctgggcgaggacgggcgcccccgggcgttccaggagaccgccggacgggtcggc
tcccggctcgacgtggcctccgcccaggccgcgctcccggtcttcccggtcttcttcgac
ctgctctacgtcgacggccgcgacctgctggagctgtccaccgccgatcgccacgccgaa
ctggccgcgctggtgccggtcccgctgcgggtacgccgcatcgtcgccgaggacccgggt
tcccccgcggaccgggccgccgccgaggagttcaccgaggccaccctggcccgcggccac
gagggcgtggtgctcaaggcgctcgacgccccgtacagcgcgggccggcgcggtgcctcg
tggctgaaggtcaagcccgtgcacaccctcgacctggtggtgctggccgccgagtgggga
cacggacggcgcaccggcaagctgtccaacctccacctgggcgcccgccgccgcaacggc
accttcgccatgctcggcaagacgttcaaggggctcaccgacgccatgctggagtggcag
accgagcgcctgcaggagctgacggtgcacgacgaacgctggggcgtcgtggtccgcccc
gaactggtggtggaggtcgccttcgacggcgtgcagcgttccccgcgctaccccgagggg
gtcaccctgcggttcgcccgggtgctgcgctaccgggaggacaagacgcccgaccaggcc
gacaccgtggagaccgtactggggctgcgcgccccggccgcgccggccccgtga

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