Streptomyces cyaneogriseus: TU94_19430
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Entry
TU94_19430 CDS
T03687
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TU94_19430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scw03021
]
TU94_19430
03400 DNA repair and recombination proteins [BR:
scw03400
]
TU94_19430
Enzymes [BR:
scw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TU94_19430
Transcription machinery [BR:
scw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TU94_19430
DNA repair and recombination proteins [BR:
scw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TU94_19430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AJP03322
UniProt:
A0A0C5FTD5
LinkDB
All DBs
Position
4591019..4594918
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDEERRQRDLPSLEAHVSVERQQIEQRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLYFLTTDAEGREIKGE
GRAFASVAEAIMAFDAGELSLQAPVDIRFPVGTIPPRGWEPPVREEGEPEWQQGDSFTLR
TTLGRALFNELLPEDYPFVDYEVGKKQLSQIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNDNFPKTNPIFMMVSSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLRLRIAERN
AEGVLLKAEDVETSVYARCLAEDIVVDGKVLAPAGTDLGDVLIDELIRHGVEEVKTRSVL
TCESAVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVVTPDDGSDETAYPISKRAKV
LVREGDHVEVGQQLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSRFEQENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGSGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacctg
gcgccgaaggacctggagaaggtcatctacttcgccgcgtacatgatcacgtacgtggac
gaggagcgccgtcagcgcgacctgccctcgctggaggcccacgtctccgtcgagcgccag
cagatcgagcagcgccgcgacgccgacctggaggcccgcgccaagaagctcgagacggac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctccgcgaccgcgcccagcgcgagatcgaccgcctcgac
gaggtgtggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggcggagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctgaaggtcgtctcc
gcgttcctgcagacctccaacagccccaagggcatggtgctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcg
ctgttcgacaacggccgccgtggccgtccggtcaccggcccgggcaaccgtccgctgaag
tccctcagcgacatgctgaagggcaagcagggccgcttccgccagaacctgctcggtaag
cgcgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtcgagcgcggccgc
acggtcgtgtacgacgtgctggaagaggtcatcgcggagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtgctgggtctgtacttcctcaccaccgacgccgagggccgcgagatcaagggcgag
ggccgcgcgttcgcgtcggtcgccgaggcgatcatggccttcgacgccggcgagctgtcg
ctccaggcgccggtcgacatccgcttcccggtgggcaccatcccgccgcggggctgggag
ccgccggtccgcgaggagggcgagccggagtggcagcagggtgacagcttcaccctgcgg
accaccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctcccagatcgtcaacgacctggccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttctactgggccacc
cgctccggtgtcaccgtggccatctccgacgtcgtcgtgcccgaggcgaagaaggagatc
gtccgcggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgacaacttcccgaagaccaacccgatcttcatgatggtgagctcg
ggtgcgcgaggcaacatgatgcagatgcgtcagatcgccggtatgcgtggtcttgtgtcg
aacgcgaagaacgagacgatcccgcggcccatcaaggcctcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgctctg
cgtaccgccgactcgggttacctcacccgtcgtctcgtcgacgtctcccaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggtctgcggctgcggatcgccgagcggaac
gccgagggcgtgctcctcaaggcggaggacgtcgagacgtccgtgtacgcgcgctgcctc
gccgaggacatcgtcgtggacggcaaggtgctggccccggccggtaccgacctgggcgac
gtgctcatcgacgagctgatccggcacggcgtcgaggaggtcaagacccgctcggtcctg
acctgcgagtccgccgtcggcacctgcgcgatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgggtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcctacccgatctcgaagcgcgccaaggtc
ctggtccgcgagggcgaccacgtcgaggtgggccagcagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtgtacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcccgcttcgagcaggagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggccgtccgcagctcatgggtatcaccaaggcgtcgctggccacc
gagtcctggctgtcggcggcgtccttccaggagacgaccagggtcctcacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
tccggctccggccaggccgtgccgctggaggactacgactacggtccgtacaaccagtaa
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