Streptomyces sp. CdTB01: AS200_10885
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Entry
AS200_10885 CDS
T04240
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scx
Streptomyces sp. CdTB01
Pathway
scx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS200_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scx03000
]
AS200_10885
03400 DNA repair and recombination proteins [BR:
scx03400
]
AS200_10885
Enzymes [BR:
scx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AS200_10885
Transcription factors [BR:
scx03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AS200_10885
DNA repair and recombination proteins [BR:
scx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS200_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ALV38491
UniProt:
A0A0U3P3X0
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All DBs
Position
complement(2465568..2467064)
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AA seq
498 aa
AA seq
DB search
MHTDRERCVRAVRSKDARFDGWFFTAVLTTRIYCRPSCPVVPPKPENMTFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNQRADLVARAMRLIADGVVDRDGVPGLAARLGYSTRQVERQ
LLAELGAGPLALARAQRAQTARLLIETTPLPMAEIAFAAGFSSIRTFNDTVREVFALSPS
ELRARLPKTRNPATTPGTLALRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLRL
PYGHGIASLTPRPDHIACRLTLSDLRDLPVAISRCRRMLDLDADPVAIDEQLRADPLLAP
LVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDPEGGLTHLF
PAPEALAAVDPETLAMPRSRRATFTTLVTELASGAIHLGPESDWPETRARLLALPGFGPW
TTDVIAIRALGDPDAFLPTDLGIRRAAQELGLPSTPAALTARAAAWRPWRAYAVQYLWAT
DSHPINFLPVERKSRDIQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgaccgagagcgctgtgtgcgggccgtccgctccaaggacgcccgcttcgac
ggctggttcttcacggcggtcctgacgacccgcatctactgccggcccagctgcccggtc
gtcccgcccaagcccgagaacatgaccttccacccgagcgcggccgcctgccagcaggcc
ggcttccgcgcctgcaagcgctgccgcccggacaccagccccggctccccggagtggaac
cagcgtgccgacctcgtggcccgcgccatgcgcctgatcgccgacggcgtcgtcgaccgc
gacggcgtccccggcctcgccgcccgcctcggctacagcacccggcaggtcgaacgccag
ctcctcgccgaactcggcgcgggccccctcgccctggcccgcgcccaacgcgcccagacc
gcccgtctgttgatcgagacgaccccgctgcccatggcggagatcgccttcgcggccggg
ttctcctcgatccgcaccttcaacgacaccgtccgcgaggtcttcgccctctccccgagc
gaactgcgcgcccgcctgccgaagaccaggaacccggccaccacgcccggcacactggcc
ctccggctccccttccgcgccccgctcaaccccgacaacctcttcggccacctggccgcg
acggccgtacccggcgtcgaggagtggcgcgacggcgcctaccgccgcacgctccgcctg
ccgtacggccacggcatcgcctccctcaccccgcggccggaccacatcgcctgccgcctc
accctcagcgacctgcgcgatctgcccgtcgccatcagccgctgccgccgcatgctcgac
ctggacgccgacccggtcgcgatcgacgaacagctgcgcgcggacccgctgctcgccccg
ctcgtcgacaaggcccccggccggcgcgtcccgcggaccgtcgacgaggcggagttcgcc
gtacgggcggtcctcggccagcaggtctccacggccgcggcccgcacccacgcggcccgc
ctggtcaccgcccacggcgagccggtggacgatcccgaaggcggtctcacccatctcttc
ccggcccccgaggccctggccgccgtcgaccccgagaccctggcgatgccccgcagccgc
cgcgccaccttcaccacactcgtcaccgaactggcctcaggcgccatccacttgggtccg
gagagcgactggcccgagacccgcgcccgcctccttgccctccccggcttcggcccctgg
acgacggacgtcatcgcgattcgcgccctcggcgaccccgacgccttcctccccaccgac
ctcggaatccggcgcgccgcccaggagttgggcctgccctccaccccggcggccctcacg
gcccgcgcggcggcctggcggccctggcgggcgtacgcggtccagtacctgtgggcgacc
gacagccacccgatcaacttcctcccggtggagcgaaaaagcagggacatccagtga
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