Streptomyces sp. CdTB01: AS200_21415
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Entry
AS200_21415 CDS
T04240
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
scx
Streptomyces sp. CdTB01
Brite
KEGG Orthology (KO) [BR:
scx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scx03021
]
AS200_21415
Transcription machinery [BR:
scx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS200_21415
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_38
GemA
Motif
Other DBs
NCBI-ProteinID:
ALV34328
UniProt:
A0A0U3NNJ7
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All DBs
Position
4796706..4797485
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AA seq
259 aa
AA seq
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MYPHVGVDASGLATLRATVLNLLRDFVPTAYAVPALAGAAAAPLGPCYALADGSAAVGRR
GRAAAAGTTARRPAADSDSARMMDLVERAQAGEADAFGRLYDQYSDTVYRYIYYRVGGKA
TAEDLTSETFLRALRRIGTFTWQGRDFGAWLVTIARNLVADHFKSSRFRLEVTTGEMLDA
NEVERSPEDSVLESLSNAALLEAVRRLNPQQQECVTLRFLQGLSVAETARVMGKNEGAIK
TLQYRAVRTLARLLPDDAR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgtacccacacgtcggggttgacgcctcgggcctggctacgctgcgcgcaacggtcctc
aacctgttgcgcgacttcgtccccaccgcgtacgccgtccccgccctcgcgggcgccgcg
gccgcgccgctcggtccgtgctacgcactggccgacggcagcgccgcggtcggcagacga
ggccgcgcggccgccgccggcaccaccgcgcgccgcccggccgcggacagcgacagcgcc
cggatgatggacctggtcgagcgggcccaggccggcgaggccgacgccttcgggcgcctc
tacgaccagtacagcgacaccgtctaccggtacatctactaccgcgtgggcgggaaggcc
accgccgaggacctcaccagcgagacgttcctgcgcgccctgcgccgcatcggcacgttc
acctggcagggccgcgacttcggcgcctggctggtcacgatcgcccgcaacctggtcgcc
gaccacttcaagtcgagccgcttccggctggaggtgaccaccggcgagatgctcgacgcc
aacgaggtcgagcgctccccggaggactccgtcctggagtccctctccaacgcggccctg
ctggaggccgtccgccggctcaacccgcagcagcaggagtgtgtgaccctgcgcttcctg
cagggcctgtcggtcgccgagaccgcccgcgtgatgggcaagaacgagggcgcgatcaag
accctgcagtaccgggccgtgcgcaccctcgcccggttgctgccggacgacgcccgctga
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