Streptomyces sp. CdTB01: AS200_39285
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Entry
AS200_39285 CDS
T04240
Name
(GenBank) diguanylate phosphodiesterase
Organism
scx
Streptomyces sp. CdTB01
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Gene cluster
GFIT
Motif
Pfam:
GAF
HTH_30
GAF_2
GGDEF_2
GAF_3
Motif
Other DBs
NCBI-ProteinID:
ALV39005
UniProt:
A0A0U3QI85
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Position
8802535..8804481
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AA seq
648 aa
AA seq
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MSRDHVQSAERSAEAPPAAPTGVETPFLELLARGASADAYEQPVLLARAEGRPAETIGGL
ERAKVLALRVRAELEGRRRREAELSALFETAHDLAGLRDLDAVLKAIVQRARSLLGTDVA
YLSLNDPERGDTYMRVTEGSVAARFQQLRLGMGEGLGGLVAQTARPYVTDDYFKDARFQH
TRTIDAGVRDEGLVAILGVPLTLGHHVIGVLFAADRRARVFEREQIALLGSFAALAAAAI
DTANLLTETRSALAGLERANEIIRDRSAVIERASDVHDRLAELVLRGGGVHDVAAAVSQV
LDGTVEFTEAADTAAAPLEASRAEGHAVRHADDWIAAVTAGGELLGALVLRGHPGLDPVD
QLTLERAAMVTSLLLLARRSAADAEQRVRGELLDDLLDARDRDPRLLRERACRLHADLDS
THVVLAARLDGPAADAEQEAAARRRLGAAASHLAATRHGLAAARDGGTVLLLPLTAGETT
TGLARRTARQLGTAVHEPVTVGASAPVRDLAAHPDRVAAGYAEGRRCLEALRLLGRAGDG
AAAEDFGFLGLLLAGDRDIAGFVDRTIGQVVAYDERRGTDLVRTLDAYFTCGMSPARTKD
ALHVHVNTVAQRLERVGRLLGDDWQDPARALEIQLALRLHRLSAPAQH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgatcacgtgcagtccgccgagcgctccgccgaagcgccgcccgccgcgccc
accggcgtcgagacgccgttcctggagctgctggccaggggagcgtcggccgacgcctac
gagcagccggtgctcctggcccgcgccgagggacggcccgccgagacgatcggcgggctg
gagcgggccaaggtgctcgccctgcgggtgcgcgcggagctggagggccggcgccgccgc
gaagccgagctgtcggcactcttcgagaccgcccacgacctcgcgggcctgcgcgacctg
gacgcggtcctcaaggcgatcgtgcagcgcgcccgctccctgctgggcacggacgtcgcc
tacctcagcctcaacgaccccgagcgcggcgacacctacatgcgggtgaccgagggctcg
gtcgccgcccgcttccagcagctgcggctcggcatgggggagggcctcggcgggctggtg
gcccagaccgcccgcccctacgtcaccgacgactacttcaaggacgcccgcttccagcac
acccgcacgatcgacgccggtgtccgtgacgagggcctggtcgccatcctcggcgtgccc
ctgacgctgggccaccacgtgatcggcgtgctcttcgccgccgaccggcgcgcccgggtc
ttcgaacgcgagcagatcgccctgctgggctccttcgccgcactggccgcggccgccatc
gacaccgccaacctgctcaccgagacccgctcggccctcgccggcctggagcgggccaac
gagatcatccgggaccgcagcgcggtcatcgagcgcgcctccgacgttcacgaccggctc
gccgagctcgtgctgcgcggcggcggggtgcacgacgtggccgcggccgtctcccaggtc
ctcgacggcacggtcgagttcaccgaggccgccgacaccgccgcggcgcccctggaggca
tcccgtgcggagggccacgccgtacggcacgcggacgactggatcgccgccgtcaccgcc
ggcggcgaactgctcggcgctctcgtgctgcgcggccaccccggcctcgaccccgtcgac
cagctcaccctggagcgggccgcgatggtcacctcgctgctcctgctggccagacgctcc
gccgccgacgccgagcagcgcgtccgcggcgagctcctggacgacctgctcgacgcccgc
gaccgcgacccgcggctgctgcgcgagcgcgcctgccggctgcacgccgacctcgactcc
acccatgtcgtcctcgccgcccgcctcgacggccccgccgccgacgccgagcaggaggcg
gccgcccgcagacgcctgggagccgccgcctcccatctggccgcgacccggcacggcctg
gccgccgcccgcgacggcggcaccgtcctgctgctgcccctcaccgccggggagaccacg
accggcctggcccgccgcaccgcccgccagctgggcaccgctgtccacgagccggtcacc
gtcggcgcctccgctcccgtccgggacctcgccgcccaccccgaccgcgtggccgccggc
tacgccgagggccgccgctgcctggaggccctgcgcctgctggggcgcgccggcgacggt
gccgccgccgaggacttcggcttcctcggcctgctgctcgcgggcgaccgggacatcgcc
ggcttcgtcgaccgcaccatcggccaggtcgtcgcctacgacgaacgccgcggcaccgac
ctcgtgcgcaccctggacgcctacttcacctgcggcatgagcccggcccgcaccaaggac
gccctgcacgtccacgtcaacaccgtcgcccagcggctggagcgcgtaggccgcctcctc
ggcgacgactggcaggaccccgcccgcgccctggagatacaactcgccctgcgactgcac
cggttgtccgcaccggcacagcactga
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