Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_43980
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Entry
SCATT_43980 CDS
T02095
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCATT_43980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scy03400
]
SCATT_43980
Enzymes [BR:
scy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCATT_43980
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCATT_43980
DNA repair and recombination proteins [BR:
scy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCATT_43980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEW96769
UniProt:
F8JQM4
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All DBs
Position
4724380..4725258
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AA seq
292 aa
AA seq
DB search
MPELPEVEVVRRGLERWISGRTVAEVTVLHPRAVRRHPAGAEDFASRLRGTVLGPARRRG
KYLWLLLDDGGSLLGHLGMSGQLLVQPLDAPAETHLRVRIRLADDLGTELRFVDQRTFGG
LSVHPCVPDGPDAAVGLPLPLAHIAPDPLEAAFDEDAFHAALRRRRTTIKRALLDQSLIS
GVGNIYADEALWRSRLHYDRPTATLTRPRTAELVGHIREVMNEALAVGGTSFDSLYVNVN
GESGYFDRSLDAYGREDEPCRRCGTAIRRRPWMNRSSYYCPRCQRPPRPTAG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtcgaggtggtccgccgcggcctggaacggtggatcagcggc
cggacggtcgccgaggtcaccgtcctccatccgcgggcggtgcgccgccacccggccggc
gccgaggacttcgcctcgcggctgcgcggcaccgtgctcggccccgcccggcggcgcggc
aagtacctgtggctgctgctggacgacggcggctcgctcctgggccacctcgggatgagc
gggcagctgctggtccagccgctcgacgcgcccgccgagacgcacctgcgggtccggatc
cggctcgccgacgacctcggcaccgaactgcgcttcgtcgaccagcgcaccttcggcggc
ctgtcggtccacccctgcgtccccgacggcccggacgccgccgtcggccttccgctgccg
ctggcgcacatcgccccggacccgctggaggccgccttcgacgaggacgccttccacgcc
gcgctgcgccgccgccgcaccaccatcaagcgcgcgctgctcgaccagtcgctgatcagc
ggcgtcggcaacatctacgccgacgaggcgctgtggcgcagcaggctccactacgaccgc
cccaccgccaccttgacccgcccgcgcaccgccgaactcgtcggccacatccgcgaggtg
atgaacgaggcgctggcggtcggcggcaccagcttcgacagcctgtacgtcaacgtcaac
ggcgagtccgggtacttcgaccgctcgctggacgcctacgggcgcgaggacgagccgtgc
cggcgctgcggtacggcgatccggcggcggccgtggatgaaccggtcgagctactactgc
ccgcgctgccagcggcctccgcgccccacggccggctga
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