Streptomyces cyaneochromogenes: EJ357_27585
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Entry
EJ357_27585 CDS
T06811
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scya
Streptomyces cyaneochromogenes
Pathway
scya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EJ357_27585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scya03021
]
EJ357_27585
03400 DNA repair and recombination proteins [BR:
scya03400
]
EJ357_27585
Enzymes [BR:
scya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EJ357_27585
Transcription machinery [BR:
scya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EJ357_27585
DNA repair and recombination proteins [BR:
scya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EJ357_27585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
AZQ36741
UniProt:
A0A3S9MC16
LinkDB
All DBs
Position
6034296..6038195
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWTRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDSEMRDVKGV
DRSFSSVAEAIMAFDAGELSLQSKIDIRFPVGTIPPRGWTPPAQEEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKASGFYWAT
RSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNENFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLKIAYRG
ADGVLRKAEDVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDQLVHHGVEEVKTRSIL
TCESHVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEATGRVRIEETEKTKKIVVTPDDGSDETAYPISKRARL
LVSEGEHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgcct
gtcacgcacatctggtacttcaagggtgtcccctcgcgcctcggctacctgctggacctg
gcgccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgttcgtcgac
gaggagcgccgtacccgcgacctgccctccctggaggcgcacgtctcggtcgagcggcag
cagatcgagaaccgccgggacgccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgtgagatgaagcagctgcgtgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtgtggacccggttcaagaacctcaaggtccaggacctcgagggcgacgagctcctc
taccgcgagctgcgggaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagaagctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctgaagcggctgaaggtcgtgtct
gccttcctgcagacctccaacagccccaagggcatggtcctcgactgcgtcccggtcatc
ccgccggaccttcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgtctgaagaggctcctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgcttcaggaggctgttgacgcc
ctcttcgacaacggtcgtcgtggtcgcccggtcaccggtccgggtaaccgcccgctgaag
tccctcagcgacatgctgaagggtaagcagggtcgattccgtcagaacctgctcggtaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgcggccgt
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggttctgctgaaccgt
gctcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccacggacagcgagatgcgggacgtgaagggcgtg
gaccgctccttctcctccgtggccgaggcgatcatggccttcgacgcgggcgagctctcg
ctccagtcgaagatcgacatccgcttcccggtcggcaccatcccgccgcgtggctggacc
ccgccggcgcaggaggagggcgagccggagtggcagcagggtgactcgttccgtctgcgg
acgaccctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcgtccggcttctactgggccacc
cgttccggcgtcaccgtcgccatctccgacgtcgtcgttcccgaggcgaagaaggagatc
gtccgcggttacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgtacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgagaacttcccgaagaccaacccgatcttcatgatggtgaactcg
ggtgcacgaggcaacatgatgcagatgcgtcagattgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctcgttccgtgagggtctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcgcaggacgtcatc
atccgcgaggaggactgcggcaccgagcgcggtctgaagctgaagatcgcctaccgcggt
gccgacggcgtgctgcgcaaggccgaggacgtcgagaccagcgtctacgcccgcatgctc
gccgaggacgtcgtcatcgacggcaaggtgatcgcgccggccaacgtggacctgggcgac
gtgctcatcgaccagctggtgcaccacggtgtcgaggaggtcaagacccgctcgatcctg
acctgcgagtcccacgtcggcacctgcgccatgtgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggccaccggccgcgtgcggatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacggcgtacccgatctcgaagcgtgcccgactc
ctggtcagcgagggcgagcacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggtgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgagtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctcatgggtatcaccaaggcctcgctggcgacc
gagtcgtggctctccgcggcgtccttccaggagacgaccagggtcctcacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atccctgccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gcgaaggccgcgatgtactcggccgtcggttacgacgacatcgactactcgccgttcggg
acggggtcgggtcaggctgtgccgctggaggactacgactacgggccgtacaaccagtag
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