KEGG   Saccharophagus degradans: Sde_1028
Entry
Sde_1028          CDS       T00335                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
sde  Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:sde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sde03400]
    Sde_1028
Enzymes [BR:sde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sde_1028
DNA repair and recombination proteins [BR:sde03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sde_1028
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon tRNA_anti_2 CoV_S1 SSB
Other DBs
NCBI-ProteinID: ABD80290
UniProt: Q21LY9
LinkDB
Position
complement(1313031..1316120)
AA seq 1029 aa
MQYTQLQTLTNYSFLKSASHPQELVEEAKILGYHALAITDECSLAGIVKAHVAAKELNLK
LLVGSYFELTNGFKIIAIAPNRQAYAELSGFISLARRRASKGEYEAHLSDLRFRLQQCLI
IWLPYFNNHISDVDVTTLATAFKQRLWIGVSHTLIAAEQRLFSHLNKLANALHVPLVASG
LTYMHNKNCKPLLDILTAIRENTPIQQLGTRLHSNAEVNLKPLHELNQLYPEALIQQTQV
IAQLCNFSLDELRYQYPKELVPSNTTPIAHLKKLVKEGEAKRWPQGTPEHAQKIIAMELG
LIEEMQYEYYFLTVHDIVHFARSKNILCQGRGSAANSVVCYCLFITEIAPGQINVLFERF
ISKERNEPPDIDVDFEHQRREEVIQYIYQKYGRERAALAATVITYRSRSAIRDVGKAMGL
EAGLVGQLAKSLAWWDRTGDLIKRMESFGLNPETQKTMQHFFALVQQILGFPRHLSQHVG
GFIITQDKVSDLVPLENASMPDRTIIQWDKYDIEAMGLLKVDVLALGMLTALRKSLETVS
QYDAAVYSLATIPREDPATYAMLSKGDSIGVFQVESRAQMSMLPRLRPKCFYDLVIEIAI
VRPGPIQGDMVHPYLRRRDGIEEVHYQNDKIKSVLEPTLGIPIFQEQAIRLAMVAADFSG
GEADQLRRAMASWGKNGSLLKFEDKFIQGMLNNGYPLDFAHRLFEQIKGFGGYGFPESHS
ASFALLCYASSWLKCHHPAAFYCALLNSQPMGFYSASQLIQDARRHKVVVLPVEVNASGY
ESHVVLTNHNTSAPPNIIQLGLHMIKGLSILTAERIVLAKGDKPFTTLKELSLRAQLSSA
DLQLLASADALHKLTGNRHNSRWQAAALMPHSPLLDGAELEEDALNTPAPSIEKNIQTDF
NSTGLSLRLHPMALLRAQQPFNRCKKQSELASIHNGGFAQVAGLVTGRQRPGTAKGTLFL
TLEDETGNINIVVWTSTQERCRQALLTAKLLLVKGRLETKDNVTHIIAGQMFDYSHMLSE
FDIKSRDFH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgcaatacacccaactacaaaccctaaccaactacagcttcctaaaaagcgcatcacac
ccgcaggaacttgtagaagaagccaaaatactcggctaccacgccctcgccattaccgac
gagtgctcgctggcgggtattgtaaaagcgcatgtcgcagcaaaagaactcaacctaaag
ctactagtaggtagttattttgaattaaccaacggctttaaaataatcgccatcgccccc
aaccgacaagcctacgcagaattatcgggttttatttctttagcgcgacgacgtgcaagt
aaaggcgagtatgaggcgcatttatccgatttacggtttcgtttacaacagtgtttaatt
atttggctgccgtattttaacaaccatattagcgatgtagatgtaaccaccctcgcaacc
gcatttaagcaacggctgtggataggcgttagccatacacttatcgccgcagaacaacga
ttattcagccacttaaataaattagcgaacgcactacatgtgcccctagtggcaagcggg
cttacctatatgcacaataaaaattgtaaacccttgctagatatattaaccgccattaga
gagaacacacctatccaacaattgggaacacgcttacacagcaatgcagaagtgaactta
aaaccgctgcatgaacttaatcaactttaccccgaagcgttaatccagcaaacgcaggtt
attgcacaactttgtaatttctctttagatgagttgcgttaccaatacccaaaagaactt
gtgcccagcaatacaacgccaatagcccacttaaaaaaactggttaaagaaggggaagcc
aagcgctggccacaaggcacccccgaacacgcgcaaaaaattattgctatggagctaggc
ttaattgaggagatgcaatacgaatattattttttaaccgtacacgacatagtgcacttt
gctcgcagtaaaaatattttatgccaagggcgaggctcggccgccaattcggtggtgtgc
tactgcttgtttattaccgagattgcccccgggcaaattaacgttttatttgagcggttt
atctctaaagagcgcaatgaaccgccagatattgatgtagactttgaacaccagcgccgc
gaagaagtaattcagtatatttatcaaaaatatggtcgtgagcgcgcagctttagccgca
acagttataacctaccgcagccgcagcgccattcgcgatgtaggtaaagctatgggccta
gaggcaggccttgtggggcaattagcaaaatcgctagcttggtgggatagaactggcgat
ttaattaaacgcatggagtcttttggccttaacccagaaacacaaaaaaccatgcagcat
ttttttgccttagtgcaacagatacttggctttcctcgccacttatcgcagcacgtgggt
ggttttattattacgcaggataaggtcagcgatcttgtgccgctagaaaatgccagcatg
cccgaccgcactattattcagtgggataaatacgacatagaagccatgggcttactaaaa
gtggatgtgttagcgttgggtatgcttaccgctttgcgtaaatcattagaaaccgttagc
cagtacgacgcagcagtttactccctcgccactattccacgtgaagatccagccacttac
gccatgctaagtaaaggcgatagcattggtgtgtttcaagtggaatcgcgcgcgcaaatg
tctatgctgccgcgcttacgacctaagtgcttttacgatttggttattgaaattgccatt
gtaaggccagggcctattcaaggcgacatggttcacccttatttacgccggcgcgacggc
attgaagaggtgcactaccagaacgataaaataaaaagcgtattggagcccaccctcggc
attcctatttttcaggagcaagctattcgcttggccatggtagctgcagattttagcggc
ggcgaagcagaccaattgcggcgggccatggcaagctggggcaagaatggtagcctacta
aaattcgaagataaatttattcaaggtatgctaaacaacggctacccacttgattttgct
caccgtttattcgagcaaataaaaggctttggcggttatgggtttcctgaatcacactcg
gccagttttgctttattgtgctacgcctcatcgtggctaaaatgccaccacccagcggca
ttttattgcgcactacttaatagccaaccaatggggttttactctgcctcgcaacttatt
caagatgctcgtcgccataaagtcgttgtattaccggtagaagttaatgctagcggttac
gaaagccacgtagtattaaccaaccacaatacatcggcgccccccaatattattcagctt
ggtttgcatatgattaagggcttaagcatactcaccgcagagcgcattgtgcttgctaaa
ggcgataagccgtttactacattaaaagagttaagcctacgcgcacaacttagcagcgcc
gatttacaactgctggcatccgccgatgcattgcacaaacttaccggcaacagacacaac
agtcgttggcaggctgccgcccttatgccgcacagcccactgctagacggcgccgaacta
gaagaagacgcacttaatactcctgcgcccagtatagaaaaaaatattcaaactgatttt
aacagcacggggctttctttgcggctacaccctatggctttgctgcgcgcccagcagccc
tttaaccgctgtaaaaaacaaagcgaattggcaagtatacacaacggtggctttgcccaa
gttgccgggctagtaaccggcaggcagcgcccaggcacagccaaaggcacattgttttta
accctagaagacgaaaccggcaatataaatattgtagtgtggaccagcacccaagagcgc
tgccgccaagccttacttaccgccaagctattattggttaaaggccgcttagaaacgaaa
gacaacgtcacccatattattgcagggcaaatgtttgattactcgcacatgctaagtgaa
tttgatattaagtcgcgcgactttcattaa

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