KEGG   Saccharophagus degradans: Sde_2031
Entry
Sde_2031          CDS       T00335                                 
Name
(GenBank) ABC transporter related
  KO
K10823  oligopeptide transport system ATP-binding protein
K15583  oligopeptide transport system ATP-binding protein
Organism
sde  Saccharophagus degradans
Pathway
sde01501  beta-Lactam resistance
sde02010  ABC transporters
sde02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sde00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Sde_2031
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sde_2031
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Sde_2031
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sde02000]
    Sde_2031
Transporters [BR:sde02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    Sde_2031
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N AAA_22 AAA_16 nSTAND1 AAA_29 PRK ATP-synt_ab AAA MobB ABC_ATPase RsgA_GTPase NB-ARC Mg_chelatase AAA_5 NACHT SLFN-g3_helicase DUF2666 TsaE
Other DBs
NCBI-ProteinID: ABD81291
UniProt: Q21J38
LinkDB
Position
2559095..2560714
AA seq 539 aa
MSHLIVKNLTTHFYTREGLTTAVDNVSFTLEAGQILGIVGESGSGKSVACYSLLGLIPSP
PGKVVNGSALFNGEDLLTKTEAELRSVRGRKISMIFQDPMTSLNPHMRIGDQLIEAYRLH
HKSTKKQATEKAIQLLQEVGIKDADTRIRAYPHEFSGGMRQRAMIAMALITEPELLIADE
PTTALDVTVQAQILQLIKSIQQKRHLSVIFISHDLAVVSQIADQLIVMKEGKVVESGATA
SVFSEQKHPYTKKLIAAIPNKAKQVKYTATETNPLLTVNNLSTSFAQETTSWFGKKAARK
VVVKDISFSIQQGEILGLVGESGSGKSTLGRSVIKLINADNGEINIDQHCIHTLQGDKLK
QARKDFQMIFQDPYASLNPRLTVFDALAEPLLLHGIANKTNVVEKVNTLMDDVGLARKFV
RKYPHEFSGGQRQRIAIARALAPQPKLIIADEPVSALDVTIQAQILELLLNLTQKHCLAM
LFISHDLAVVRYLCDRVMVMHNGNLVEQGPTEDIYNQPTHPYTQTLISAIPTFMTQNMH
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgagccacctaatagttaaaaatttaaccacccacttttatacacgcgaaggtttaacc
accgctgtagataacgttagctttaccctagaagcgggccaaatacttggcatagttggc
gaatccggctcgggtaaatctgttgcttgctacagtttgctaggtttaattcctagccca
ccgggcaaagtggttaatggcagcgctctgtttaacggcgaagaccttcttactaaaaca
gaagcggaattacgcagtgtgcgcggcagaaaaattagcatgatttttcaagaccctatg
acctccctcaacccgcacatgcgtataggtgatcaactaatagaagcctatcgcttgcac
cacaaaagcactaaaaaacaggcaaccgaaaaggcgatacagcttctacaagaagtgggt
attaaagacgccgacacacgcatacgtgcctaccctcatgaattttctggcggtatgcga
cagcgcgccatgatcgccatggctttgattaccgagccagaattattaatagccgacgaa
ccaacaactgcactggacgtaaccgtacaagcgcaaattctacagttgattaaatcgatc
cagcagaagcgacacctaagtgtcatttttatttcgcacgacttagctgtagtttcacaa
attgccgaccagcttatcgttatgaaagaaggtaaggtggtagaaagcggtgcaactgcg
agcgtttttagcgagcaaaagcacccttatacaaaaaaattaattgctgctattcccaat
aaagccaagcaggttaaatataccgctaccgaaaccaaccctttgttaacggttaataat
ctttccaccagcttcgcgcaagaaaccaccagttggtttggcaaaaaggccgcccgtaag
gtagtggtaaaagatattagcttttcaattcagcaaggcgaaatactcgggttagttggt
gagtctggctcgggtaaatctacccttggtcgcagtgttattaaattaattaacgccgat
aacggcgaaataaacatagaccaacattgcattcacaccttgcaaggtgacaagctaaaa
caagcccgcaaagattttcaaatgatctttcaagacccgtacgcgtcgcttaacccaagg
ttaacggtatttgacgcgctggcagaaccgctgcttttgcacggcattgccaacaaaacc
aatgtggtggagaaagttaacaccttaatggatgacgtaggccttgcccgtaagtttgtg
cgcaaatacccccatgagttttctggtggccagcgccagcgtatagccatagctcgcgcc
ttagccccacaaccaaagctcataattgccgatgagcccgtatcggcgttggatgtaacc
atccaagcacaaatattagagctactgcttaaccttactcaaaagcactgcctcgctatg
ttatttatttcgcacgatttagccgttgtgcgctacctgtgcgaccgagtaatggttatg
cacaacggcaaccttgtagagcaagggcctaccgaagacatttataaccagcccactcac
ccttatacccaaacgttaattagcgcgattccaacttttatgacacaaaatatgcactaa

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