Saccharophagus degradans: Sde_2031
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Entry
Sde_2031 CDS
T00335
Name
(GenBank) ABC transporter related
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
sde
Saccharophagus degradans
Pathway
sde01501
beta-Lactam resistance
sde02010
ABC transporters
sde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sde_2031
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sde_2031
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sde_2031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_2031
Transporters [BR:
sde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Sde_2031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
nSTAND1
AAA_29
PRK
ATP-synt_ab
AAA
MobB
ABC_ATPase
RsgA_GTPase
NB-ARC
Mg_chelatase
AAA_5
NACHT
SLFN-g3_helicase
DUF2666
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABD81291
UniProt:
Q21J38
LinkDB
All DBs
Position
2559095..2560714
Genome browser
AA seq
539 aa
AA seq
DB search
MSHLIVKNLTTHFYTREGLTTAVDNVSFTLEAGQILGIVGESGSGKSVACYSLLGLIPSP
PGKVVNGSALFNGEDLLTKTEAELRSVRGRKISMIFQDPMTSLNPHMRIGDQLIEAYRLH
HKSTKKQATEKAIQLLQEVGIKDADTRIRAYPHEFSGGMRQRAMIAMALITEPELLIADE
PTTALDVTVQAQILQLIKSIQQKRHLSVIFISHDLAVVSQIADQLIVMKEGKVVESGATA
SVFSEQKHPYTKKLIAAIPNKAKQVKYTATETNPLLTVNNLSTSFAQETTSWFGKKAARK
VVVKDISFSIQQGEILGLVGESGSGKSTLGRSVIKLINADNGEINIDQHCIHTLQGDKLK
QARKDFQMIFQDPYASLNPRLTVFDALAEPLLLHGIANKTNVVEKVNTLMDDVGLARKFV
RKYPHEFSGGQRQRIAIARALAPQPKLIIADEPVSALDVTIQAQILELLLNLTQKHCLAM
LFISHDLAVVRYLCDRVMVMHNGNLVEQGPTEDIYNQPTHPYTQTLISAIPTFMTQNMH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagccacctaatagttaaaaatttaaccacccacttttatacacgcgaaggtttaacc
accgctgtagataacgttagctttaccctagaagcgggccaaatacttggcatagttggc
gaatccggctcgggtaaatctgttgcttgctacagtttgctaggtttaattcctagccca
ccgggcaaagtggttaatggcagcgctctgtttaacggcgaagaccttcttactaaaaca
gaagcggaattacgcagtgtgcgcggcagaaaaattagcatgatttttcaagaccctatg
acctccctcaacccgcacatgcgtataggtgatcaactaatagaagcctatcgcttgcac
cacaaaagcactaaaaaacaggcaaccgaaaaggcgatacagcttctacaagaagtgggt
attaaagacgccgacacacgcatacgtgcctaccctcatgaattttctggcggtatgcga
cagcgcgccatgatcgccatggctttgattaccgagccagaattattaatagccgacgaa
ccaacaactgcactggacgtaaccgtacaagcgcaaattctacagttgattaaatcgatc
cagcagaagcgacacctaagtgtcatttttatttcgcacgacttagctgtagtttcacaa
attgccgaccagcttatcgttatgaaagaaggtaaggtggtagaaagcggtgcaactgcg
agcgtttttagcgagcaaaagcacccttatacaaaaaaattaattgctgctattcccaat
aaagccaagcaggttaaatataccgctaccgaaaccaaccctttgttaacggttaataat
ctttccaccagcttcgcgcaagaaaccaccagttggtttggcaaaaaggccgcccgtaag
gtagtggtaaaagatattagcttttcaattcagcaaggcgaaatactcgggttagttggt
gagtctggctcgggtaaatctacccttggtcgcagtgttattaaattaattaacgccgat
aacggcgaaataaacatagaccaacattgcattcacaccttgcaaggtgacaagctaaaa
caagcccgcaaagattttcaaatgatctttcaagacccgtacgcgtcgcttaacccaagg
ttaacggtatttgacgcgctggcagaaccgctgcttttgcacggcattgccaacaaaacc
aatgtggtggagaaagttaacaccttaatggatgacgtaggccttgcccgtaagtttgtg
cgcaaatacccccatgagttttctggtggccagcgccagcgtatagccatagctcgcgcc
ttagccccacaaccaaagctcataattgccgatgagcccgtatcggcgttggatgtaacc
atccaagcacaaatattagagctactgcttaaccttactcaaaagcactgcctcgctatg
ttatttatttcgcacgatttagccgttgtgcgctacctgtgcgaccgagtaatggttatg
cacaacggcaaccttgtagagcaagggcctaccgaagacatttataaccagcccactcac
ccttatacccaaacgttaattagcgcgattccaacttttatgacacaaaatatgcactaa
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