Saccharophagus degradans: Sde_2148
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Entry
Sde_2148 CDS
T00335
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sde03032
]
Sde_2148
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_2148
Enzymes [BR:
sde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sde_2148
DNA replication proteins [BR:
sde03032
]
Prokaryotic type
DNA Topoisomerases
Sde_2148
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sde_2148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
ABD81408
UniProt:
Q21IS1
LinkDB
All DBs
Position
complement(2739614..2742274)
Genome browser
AA seq
886 aa
AA seq
DB search
MGDIAKEILPVTIEDELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMAKISHELLADLDKETVDFVPNYDGTELIPAVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLREVIKGCLALIDNPEITIDELMEHIPGPDFPTGAIINGRAGILQAYRTGRGRI
YVRAQAEVETNEKTGRETIVINEIPYQVNKARLIEKIAELVKEKKIEGISEIRDESDKDG
LRVVVEIKRGEMGEVVLNNLYAQTQLQNVFGINIVALVDDQPKLLNLKELLEYFVKHRRE
VVTRRTVYLLRKARERGHVLEGQAVAIANIDEVITLIKSSPTPADARDAMLARGWPVGAV
SEFLDRAGENACRPDGLPEEFGLREDGSYYLSPVQVQAILDLRLHRLTGMEHDKLLAEYE
EKLIQIAGYLEILGNPERLMNVIREELEVIYNDYGDERRTVIQQSMTDLTHEDLISEEDR
VVTISHGGYAKSQPLDAYQAQRRGGMGKAATSVKDEDFVEHLLIANTHDYLLCFTSVGKV
FWLKVYQIPVAGRQSRGRPVVNLLPLEEGERITSILPVREFDDDHFIFMATADGTVKKTP
LSQFARPRSVGLRAIDLVEGDHLVGTAITDGTKDIILLTSAGKAARFSEENVRSMGRVSR
GVRGVRMADDVSVIAMVVPEEGGKVLTVSENGFGKRTEVTEYPAKGRGSQGVIAMQMSER
NGCLVGATQVFEGDEIMLISNQGTLVRTRADEVSLSGRNTQGVRLIRVKEGEHIVGLERI
DEPPVPEAVEGGEESAVVENTADANEANVNAPDVSGADEDATGDDA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatagctaaagaaatccttcctgtcacgattgaagacgaactgaaaaagtct
tacctcgattacgcaatgagtgtaatcgtagggcgtgcgcttccagatgtgcgagacggc
ttaaaacccgtgcatcgccgcgtattattcgcaatgagcgaattgaataacgactggaat
aaagcctataaaaaatctgcccgtgtggtaggtgacgtaatcggtaaatatcacccgcat
ggtgattccgctgtatacgacacaattgtacgtatggcgcagcctttctcgttgcgttat
atgctggtagacgggcagggtaacttcggttcgatcgatggcgacagcgccgcggcaatg
cgttatacggaaatccgtatggccaaaatttcgcacgaactgcttgccgacctagataaa
gaaaccgtcgattttgtgcccaactacgatggcacagagcttattcccgccgtattgcca
acccgcgtgcccaacttactagtaaacggctcgtccggtattgctgtaggtatggcaact
aacattccgccgcacaacttgcgcgaagtgattaaaggttgtttggcgcttatcgataac
ccagaaattactatcgatgagttaatggagcatattcctggtccagatttcccaacgggt
gccattattaatggccgtgcaggtattttgcaggcataccgcactggtcgtggtcgtatc
tatgttcgcgcgcaagccgaagtagaaaccaacgaaaaaaccggccgcgaaaccattgtt
attaatgaaatcccttaccaggtaaacaaagcgagattaatcgaaaaaatcgccgagctg
gtaaaagaaaagaaaatagaaggcatttcagaaattcgcgacgagtccgataaagacggc
ttgcgcgtagttgtagaaattaaacgcggtgagatgggcgaagttgtacttaacaacttg
tatgctcaaacacagctacaaaacgtattcggtattaatatcgttgcgctggtggatgat
cagcccaagctattaaacctaaaagagttgcttgaatactttgttaaacaccgtcgcgaa
gtagttacacgccgtacggtttacttgttgcgcaaggcgcgtgagcgcggccatgtgtta
gaaggccaagctgtagctattgccaatatcgacgaagtaattactttaattaagtcttcg
ccaacccctgccgatgcgcgcgacgccatgcttgctcgcggctggccagtaggtgcggta
agtgaattccttgatcgcgctggcgaaaacgcttgtcgcccagatggcttaccagaagaa
tttggtttacgtgaagatggcagctactacttatcgccggttcaggttcaagccattcta
gatttacgtctccaccgtttaacgggtatggagcacgataaattacttgctgaatacgaa
gagaaattaattcaaattgcaggctacttagaaattttaggtaaccctgagcgtttgatg
aacgtaattcgtgaagagcttgaagttatttataacgattacggcgatgagcgtcgtact
gttattcagcaaagcatgaccgatcttacccacgaagatctcatcagcgaagaagatcgc
gtagtgactatttcgcacggtggctatgctaagagccagccgttagatgcataccaagcg
caacgtcgcggcggcatgggtaaggcggctacctcggttaaagatgaagatttcgtagag
catctattaattgctaatactcatgattacttattgtgctttaccagcgtaggtaaagtg
ttctggctaaaggtataccaaatacccgttgctggtcgtcaatctcgtggtcgacctgtt
gtgaatttattgccgctagaagagggcgaacgcattactagcatactgcctgtgcgtgag
ttcgacgacgatcactttatctttatggcgacagcagacggcacagtgaagaaaacacca
ttgtcgcaatttgctcgtccacgtagcgttggtttacgtgctatcgatttggttgaaggc
gaccacttggtaggcaccgcaattacagacggcacaaaagatattattttgcttacttct
gctggtaaagctgcacgctttagcgaagaaaatgttcgctctatgggccgagtttcacgc
ggtgtacgcggtgtgcgcatggccgacgacgtaagtgtaatagccatggttgtgccggaa
gaaggcggtaaagtacttactgtaagtgaaaacggctttggtaagcgtaccgaagttaca
gaataccccgcaaaaggccgcggttcgcaaggcgtaattgctatgcagatgtctgagcgt
aacggctgtttggttggtgctactcaggtatttgaaggcgatgaaattatgcttatttct
aaccagggtaccttggttagaacacgtgcagacgaagtatcgttatctggcagaaacact
cagggtgttcgcttaattcgcgttaaagagggcgaacatattgttggcctagagcgaata
gatgagccacctgtgccagaagccgttgaaggcggcgaagaatctgcagtggtagaaaat
acagcagatgctaacgaagcgaatgtgaacgctcccgatgtgagtggcgcagacgaagac
gcaactggtgacgacgcatag
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