Saccharophagus degradans: Sde_3032
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Entry
Sde_3032 CDS
T00335
Name
(GenBank) response regulator receiver modulated diguanylate cyclase/phosphodiesterase
Organism
sde
Saccharophagus degradans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Response_reg
FleQ
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
ABD82289
UniProt:
Q21G90
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Position
3872852..3874633
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AA seq
593 aa
AA seq
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MQLATHANTDTLAPLFLLIEANNQDADILEIRLRDAYQHHHAVLAVDSVQAASEALTDFE
FDALIYCSSTENLNTTDTVKAFCELTPNLPIIVITDDNDFSLANQIIASGAEDYLHKNEL
TAEALLRSLAFATQRKKAQTSHLLHSHSSLGTDSIHDITTNQNPLQQDSLTEIHNLSYFY
NYATTAIFRAQRANAQLAVLLFDINDFELINQQFGRHTGDQLLQLVAKRCENIVRHTECI
ARLYDDTFAIITDTLNHEHEAYPLVTRLQQCFDSPFETSQKQIVATPSIGVAFLPQPADL
NHWVKQADAAKTQAKASAKTNVEFASESASAGYKRTQSVAAKIEKGLQGREFSTVFQSYY
CDDDSNPLYAEAFSRWRSTSLGNVAPREFLPALSQNSMLDELTKQVLANVAQLQEQALAA
NRPIGKFSVNISTAQLHDRIFCENFLHWLSVNDLSSNTICLEISERESINAILACKSNIH
FLHQQGISFALDNFGTGNTAMTQLADLPIDYLKIDRAITQNIDTNKPMQALSSSVIKMAH
KLGIKVVAEGIETQEEFYVLRAFDCDFYQGFYFGQPCNSHTLMQEQTVDMRAH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagctacccacgccaatacagataccctagcccctctctttttgcttattgaa
gcgaataaccaagacgcagatatacttgaaataaggttgcgagacgcgtaccaacaccac
cacgcggtactcgctgtagattcggttcaagccgctagcgaagcgcttacagactttgag
ttcgacgcgcttatttattgctctagcacagaaaacctaaacacaaccgatacagtaaaa
gcgttttgcgaacttacgccaaacttacccattattgtaattaccgacgataacgacttt
agcttagccaaccaaattatcgctagcggtgcagaagattacttgcataaaaacgaacta
accgcggaagcgctattgcgcagcttagcgtttgccacacaacgaaaaaaagcgcaaaca
tcgcacttattacacagccactcttcattgggcaccgattctattcacgacataacaacc
aatcaaaacccgctacaacaagattctttaacagaaatacacaacttaagttatttttac
aattacgcaaccacagccatttttcgcgcacaacgtgcaaacgctcagctagctgtttta
ttatttgatataaacgacttcgagctaattaaccaacagtttggccgtcacactggcgac
cagcttttacagttagttgctaaacgttgcgaaaacattgtgcgccacactgaatgtatt
gcacgcctatacgacgatacctttgcaattattaccgataccctaaaccacgagcacgaa
gcctacccgctggtaacgcgcctacaacaatgctttgactcaccattcgaaacgtcgcaa
aagcaaatagttgcaacgccctctattggggttgcatttttacctcaacctgcagattta
aaccattgggtaaaacaagcagacgcagccaaaacccaagccaaagccagcgctaaaacc
aacgttgaatttgcaagcgaatcggcatcggccggctacaagcgcacacaaagtgttgca
gccaaaatagaaaagggtttacagggccgtgagtttagtacggtttttcaaagctattat
tgcgatgacgacagcaacccactgtatgcagaggcgtttagccgctggcgctctacaagc
ctaggcaatgtagccccgcgtgagtttttaccagcactcagccaaaacagcatgttagat
gaattaaccaaacaggtgcttgccaatgtggcacaactgcaagagcaagcacttgccgct
aataggcctatagggaaatttagcgtaaatattagtacggctcagttacacgaccgcatt
ttttgcgaaaactttttacactggctaagcgtaaacgacttaagctcaaacactatttgt
ttagaaatttctgaacgcgaaagcattaatgccattcttgcgtgcaaaagtaatatccac
tttttacaccagcagggcattagttttgcgctagataattttggcaccggcaatacagcc
atgacccaactagcagacctacccatagattacttaaaaatagaccgcgccataacccaa
aacatagataccaacaaacccatgcaggcacttagctctagcgtaataaaaatggcgcac
aagctgggcataaaggtagtagctgaaggcatagaaacgcaggaagagttttacgtactg
cgcgcattcgactgcgacttctaccaaggcttctattttggccaaccctgtaattcacat
acgttgatgcaagaacaaaccgtagacatgagggcgcattaa
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