Sulfurospirillum deleyianum: Sdel_0046
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Entry
Sdel_0046 CDS
T01126
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sdl
Sulfurospirillum deleyianum
Pathway
sdl03410
Base excision repair
sdl03430
Mismatch repair
sdl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sdel_0046
03430 Mismatch repair
Sdel_0046
03440 Homologous recombination
Sdel_0046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdl03400
]
Sdel_0046
DNA repair and recombination proteins [BR:
sdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sdel_0046
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sdel_0046
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sdel_0046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACZ11084
UniProt:
D1B0U0
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All DBs
Position
44400..45983
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AA seq
527 aa
AA seq
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MARLLSKEEIRRILQSRFENDDCTRLNEIPKPSSLKDIAKASKRIVHAMQKGERIAIVGD
YDVDGVISSVILSQFFDDLHVNYSLVIPNRFTDGYGLNPEIVAKLDAQVIITVDNGISAL
EAAQICKEQGIDLIITDHHNVPEVLPEAYAIVNPKQEDCCFPHCEICGAQVAWYLVAALK
EELGIEYDLSSFLDLLCIAIMADMMELVGMNRVMVKKGIIELNRSKRPAFEAIRQYYGKA
TFESDDISFLIAPLINSSGRMEDARFSYEFIKSKNVDEALKLLDYIVSLNEARKEEERLL
FEATLPFVREDENIIVVWGEEWHEGIVGIVASRLSKRFKKPAIVFSIRDDKAKGSARGVG
GVNILELIRAQEKFLIGYGGHKGAAGVSIEVHHLPYFKEKLVEAASVLTQEELEADNDLL
GEISADQIDFELLEILENQEPYGQKNPKPSFLLRNIGVKVDRLIGKEGQHLKLILQEGSN
ALEALFFNYDTKVKQGDKVDILFTLSRNDYRGLVTPQLMIKQIVKKH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctaggttgctgagcaaagaagagattaggcggattttacaaagtcgatttgaaaat
gatgattgcacacgtttaaatgagattccaaagccctcttctttaaaagatattgccaaa
gcttctaagcgcattgtgcacgccatgcaaaagggtgagcgcattgcgattgttggggat
tatgatgtcgatggtgtcatctcctcagttatcttaagccagttttttgatgatttacat
gtaaattattcgttagtgattcccaatcgttttacggatggatacggtcttaatcctgag
attgttgccaaattagatgctcaagtgattatcaccgtggataatggcatttcagcgctt
gaagcagcccaaatctgtaaagaacaagggattgatctgattattacggatcatcacaat
gttccagaagttttacctgaagcctatgcgattgttaatcctaagcaagaggattgttgt
tttcctcattgtgagatttgtggcgcgcaagtagcatggtatttggttgcggctttgaaa
gaagagttgggcattgagtatgacctctcctcgtttttagacttgctctgcattgccatt
atggcggatatgatggaacttgtgggaatgaaccgtgtgatggtcaaaaaaggtatcata
gagctcaatcgctctaaacgccctgcttttgaggcaattaggcagtattatggcaaagct
acttttgagagtgatgatatctcttttttaatcgctccactgattaatagctctggacga
atggaagatgcaaggttctcttatgagtttattaagtccaaaaatgtcgatgaagcactc
aagcttttggattatattgtctctttaaatgaggcgagaaaagaagaagagcgtctttta
tttgaagccacgcttccttttgtcagggaggatgaaaatatcattgtggtgtggggtgaa
gagtggcatgaaggcattgtggggattgttgcttcaaggctctccaaacgcttcaaaaaa
cctgcgattgttttttcgattcgagatgacaaggccaaaggaagcgctagaggtgttggg
ggtgtgaatatcttggaactgattcgggcacaagagaaatttttaattggctatggtggt
cataagggggcagctggtgtctccattgaagtgcatcatttaccttatttcaaagagaaa
ttggtggaagcagccagtgttttaacgcaagaggagttagaagccgataatgaccttttg
ggtgaaattagcgcagatcagattgattttgaacttttggagattttggaaaatcaagaa
ccctatgggcagaaaaatccaaaaccaagttttttattgcgtaatattggcgtgaaagtt
gatcgtcttattggcaaagagggacaacatttaaaactgattttgcaagaaggaagtaat
gcccttgaagcactttttttcaattacgataccaaagtgaaacaaggcgataaggttgat
atcttatttaccctctcccgcaatgattatcggggtttagtaacgcctcagttgatgata
aaacaaatcgttaagaagcactaa
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