Shewanella denitrificans: Sden_0010
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Entry
Sden_0010 CDS
T00344
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sden_0010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdn03400
]
Sden_0010
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Sden_0010
DNA repair and recombination proteins [BR:
sdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sden_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABE53307
UniProt:
Q12TB9
LinkDB
All DBs
Position
14373..14936
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AA seq
187 aa
AA seq
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MQVNRCAWVSDDPLYQDYHDKVWGRPEYDSQQLFAKLCLDGQQAGLSWITILKKQQNYER
LFANFDPRLIAEFDDAKVEELMLDVGIVRNRLKVNSIIRNAKAYLAMEQQGINFSQFLWA
FVGGAPKLNNFSSMADVPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHTQD
CFCATEK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgaatcgctgtgcttgggtcagtgatgacccgctttatcaagactatcatgac
aaggtttggggcaggccagagtacgatagtcagcaattattcgccaaactctgcttggat
ggtcaacaggcggggttatcttggatcactattctaaagaaacaacaaaactatgagcgg
ctatttgctaacttcgaccctaggttaatcgctgaatttgatgatgccaaagttgaagag
ttaatgttagatgtaggtatagtgcgtaatcgtcttaaagtgaattccattattcgtaat
gccaaagcctatttggccatggagcaacaagggattaatttttcccagttcctatgggcc
tttgttggcggcgcacctaagctaaataatttctcctccatggcagatgtgccagcacaa
acccctgagtctgaagccatgtctaaggcacttaaaaagttaggttttaactttgttggc
ccgacgatatgctatgcctttatgcaagccgtaggtatggtgaacgatcatactcaagat
tgtttttgtgcaactgagaagtag
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