Shewanella denitrificans: Sden_0631
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Entry
Sden_0631 CDS
T00344
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00260
Glycine, serine and threonine metabolism
sdn00460
Cyanoamino acid metabolism
sdn00630
Glyoxylate and dicarboxylate metabolism
sdn00670
One carbon pool by folate
sdn00680
Methane metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01230
Biosynthesis of amino acids
sdn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sden_0631
09102 Energy metabolism
00680 Methane metabolism
Sden_0631
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sden_0631
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Sden_0631
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Sden_0631
Enzymes [BR:
sdn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Sden_0631
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
ABE53921
UniProt:
Q12RK5
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Position
complement(726587..727942)
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AA seq
451 aa
AA seq
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MTSENSLIYGQADLLAKGLQELATHDPELMGILDADVKRQHNTLSLVASCCAVKTRTLAA
SASVLVNVTAEGTPGRRYHAGCENVDLVESLAISRARQLFDAQYAGVQSHSASSANYQVL
SAFLEPGDTLLGMSLDHGGHLTHGSPVTFSGSYYQAIGYGTTSQGLIDYDEVLKLARLHK
PRLIICGATAYSRIVDFERFREIADEVGAILLADISHIAGLVATGRHPSPINAAHVTTTC
THKQLAGPRGGLIMSGRDANEMVPGRNKTFAASLEQSVFPWMQGAPAVNIIAAKAAAFGY
AMSPEFDAYMERIRTAADTVAMAFQQKDYEVVGRKSENHTVLIRLRGDLTGAIAESALEK
CGIIVNKNRVPGETRSAFVTSGLRIGTGSLAQRNLDPEGCLRVVDLICKILDEVKPLGDR
EYTLDPTMEQQFRAQAKALCVAFPLEDYTQP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacatccgaaaactctttgatttacgggcaagctgatttgttagcaaaaggcttgcaa
gaactcgccactcatgacccagaacttatgggaattttagacgctgacgtaaaacgacaa
cataataccttgtcactggtcgcttcttgctgtgcagtcaaaactcgaacattagcagca
tctgcttctgtcttggtgaatgtcacagccgaaggcacaccgggtcgacgctaccacgca
ggatgtgaaaatgtcgatttagttgaatcgctggcaatttcaagagcacggcaattattt
gatgcacaatacgctggggtacagtcccactcggcatcaagtgccaattaccaagtactt
tcagcctttcttgaacctggagacactttgctagggatgagtttagatcacggcggacac
cttacacatggaagcccagtcactttctccggaagttattatcaagctataggttacgga
actacgtcccaaggactgatagattatgatgaggtgcttaagttagctaggcttcataaa
ccccgactgattatttgcggagctaccgcttattcacggatcgtcgatttcgaaagattc
cgtgagattgccgatgaggtcggggccattctactggctgacatttcacatattgcagga
cttgtcgcaacagggcgtcatccgagtccgatcaatgcagcacatgttacgactacttgt
acccacaaacagctcgcgggacctcgtggcggcttgatcatgtcaggccgcgatgcgaac
gaaatggttccagggcgaaataaaaccttcgccgcctctcttgaacaatctgtattccct
tggatgcaaggcgctcccgccgtgaatatcatcgccgccaaagccgctgcatttggctat
gcaatgtcaccagagtttgatgcctatatggaacggataagaactgcggcagacacagtg
gcaatggcttttcagcaaaaagattacgaagtggtgggaagaaagtctgagaaccacact
gttttgatccgtttacgtggcgatcttaccggtgctatagccgagtcagccttggagaaa
tgcggaattatagtgaacaaaaatcgcgtccctggtgagacacgatcggcattcgttacc
agtggcttacgcattggtacaggctctttggcacaaaggaaccttgatcctgagggctgc
ctcagagttgtcgatttgatttgtaagattctagacgaggtaaaacctctgggcgatcga
gaatacacactcgaccccacaatggagcaacagttccgggcacaggccaaggctttgtgt
gtcgccttcccactggaagattatacccagccataa
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