Shewanella denitrificans: Sden_0726
Help
Entry
Sden_0726 CDS
T00344
Name
(GenBank) peptidase U32
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdn01002
]
Sden_0726
Peptidases and inhibitors [BR:
sdn01002
]
Peptidases of unknown catalytic type
Family U32
Sden_0726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
ABE54016
UniProt:
Q12RB0
LinkDB
All DBs
Position
839341..841344
Genome browser
AA seq
667 aa
AA seq
DB search
MPSVEIFTPTKITQTPVDPKGTAAVSANRLASATNAATLPKRQLELLAPAKNADYGIEAI
RHGADAVYIGGPAFGARHNAGNSVEDIKRLTAFAHSYHAQVFVALNTILMDSEIDKAQAL
IWDLYHAGVDALIIQDMGVLQLELPPIALHASTQMDNRTPEKAIFLEQVGFSQVVLAREL
NIPQIRDIAASTKMKLEFFIHGALCVSYSGLCNLSHAYSNRSANRGECSQMCRLPCNLTT
RDGDVLAENQHLLSLKDNNQTDNLEALIDAGVSSFKIEGRLKDITYLKNVTAHYRQQLDA
IIAKRDDLESISHGSCEFNFNPDPDKSFNRGKTDYFVNERTEAIEHFSSPKFIGEKVGRI
TKVGKDSVTVDTSESGKDIQFNNGDGLCFFVEQFEKQRLSDDKLSGLRVNRAEGNILHLT
EVPKDLKVGVVLYRNFDHKFEATLNKESAKRKISVDMQLFDTDSGVGLSMSDMHGHSVTV
TLACAKEAANDQAKAAENINKQLGKLGSSDFVLNKLNLKLTQMWFLPASALNELRRDAIE
ALMTVRLESYQRPERWQHDKSARFPQKALSFLSNVANEKAKSFYEQHGVIQIEDTYEKNK
VLHDAPLMVTKHCLRYSFNLCPKEVEGIKADPMFLDVGKDKLKLVFDCQKCEMMIVGTNQ
QVKQVNQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggttgaaatttttacgccaactaagataactcaaaccccagttgaccctaag
gggaccgccgctgttagtgcaaacaggcttgccagcgcgaccaatgcagcaaccctgcct
aagcgtcaattagagctgttagcccccgctaaaaatgctgattacggtattgaagccata
cgtcacggcgccgatgcggtttatatcggcgggccagcttttggcgcccgacacaacgct
ggtaacagtgtcgaagatatcaaacggttgacggcattcgctcacagctatcacgctcaa
gtgtttgttgccctcaataccatcttgatggatagcgagatagataaggctcaagcattg
atttgggacttgtaccatgccggtgtcgatgccttgatcatccaagacatgggcgtattg
caactcgaactaccccccattgccttgcatgccagtactcaaatggataaccgaacccca
gagaaagcgatatttttagagcaggtggggttttctcaggtggtattagcccgtgagctt
aatattccgcaaattcgtgatattgccgctagcactaagatgaagcttgaatttttcatc
catggcgctctgtgcgtgagttattcaggcttatgcaacttaagccatgcctattcaaat
cgcagtgcaaaccgcggtgaatgctcacagatgtgtcgtctgccatgcaatcttactacc
cgcgatggcgacgtgttggctgaaaaccagcatttgttgtctttaaaagataataaccag
acagataacttagaagccttgattgatgcgggcgtgagctcatttaaaattgaaggccgt
ttaaaagacattacctaccttaaaaacgtcaccgcacactatcgccagcagctggatgcc
attatcgccaagcgtgacgatcttgagtctatctctcacggcagttgtgaatttaacttc
aacccagatcccgataaaagctttaatcgcggtaaaaccgactactttgtgaatgagcgt
accgaagccatcgagcattttagctcgcctaaatttatcggtgagaaagtgggccgcatt
actaaagtgggcaaagactctgtcactgtggataccagcgaaagcggtaaagatatccag
tttaataatggcgacggcttgtgtttcttcgttgagcagttcgaaaaacaaaggttatcc
gatgataaattatcaggtcttagggtgaaccgcgccgaaggaaatattctgcatttaact
gaggtgccgaaagatttaaaagtgggcgtggtgctgtaccgtaattttgatcataaattt
gaagcgacattaaacaaagaatcggctaagcgtaaaattagtgtcgatatgcagttgttt
gataccgatagcggcgttggccttagcatgagtgatatgcatggtcatagtgtcactgtg
acgctcgcgtgtgcaaaggaagcggcaaatgatcaagccaaagccgctgaaaatattaac
aagcagctggggaaacttggcagcagtgattttgtgctcaataaacttaaccttaaattg
acacagatgtggttcttgccagcttctgcgctcaatgagctgcgccgtgatgccattgag
gcgctgatgactgtgcgtctcgagtcatatcaacgtccagagcgttggcagcatgacaaa
agtgcacgcttcccgcaaaaagcattaagcttcttatccaatgtggccaatgagaaagcc
aagtctttttatgagcagcatggggtgatccagattgaagacacctacgaaaagaacaag
gttttacatgatgcacctttaatggtgactaagcattgcctgagatacagttttaatctt
tgtcctaaggaagttgaaggcatcaaggccgaccccatgtttttagacgtaggtaaagat
aagcttaagctagtgtttgactgccaaaaatgcgaaatgatgatcgttggcaccaatcag
caggtcaagcaagtgaatcaataa
DBGET
integrated database retrieval system
