Shewanella denitrificans: Sden_2052
Help
Entry
Sden_2052 CDS
T00344
Name
(GenBank) aminodeoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_2052
Enzymes [BR:
sdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Sden_2052
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Sden_2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
ABE55334
UniProt:
Q12MJ2
LinkDB
All DBs
Position
complement(2435685..2437163)
Genome browser
AA seq
492 aa
AA seq
DB search
MKKITLASLVQLLADSGRRSQKWTAQLISQVFKGKSHNPNGAEKSKAAKPKASVSRTKAP
RPNSLKLDAVKPAPAKSTSAKPAPAKPSAPKPKQLKPKPLKPKPKQLKPKPLKTHPLKSK
SQRLKSAKLLPLKHIFKTLKKRINSVAILLAAHVKRCSLFYKWLLSVCLSLGLLAGSIYF
AIEDLKAYPEQGLKLEQTTQITINAGMSVTKLVQSLEQQGVVTESWKIRYLVKLRPELAQ
IRTGLYEIFPTDTLESFLQRVLSGKVVTFAVTLVEGKSIKEWQASLESQPRLSLSEAPFL
TVLKAHGDDSGLPEGKFYPETYHYHADEDVVELLTRSFVMMQSALNTAWEGRSDDVQVKS
AYELLILASIIEKETGQASERPLISAVFNNRLKLGMRLQTDPTVIYGMGERFNGNITRKD
LQEATAFNTYKINGLPPTPIAAPSQAALDAAAHPADVDYLYFVSRNDGSHVFSKTLKDHN
AAVNQYQRRKKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattaccttagcgtcattagtgcaattgttagcagactctggccggcgcagt
caaaaatggaccgcgcagttgatcagccaagtgttcaagggaaaatcccataatcccaat
ggggctgaaaaatccaaggctgctaagcctaaagccagcgtgtctcgaactaaagcccca
aggcccaattcgcttaaacttgatgccgttaagcccgcgccggcaaaatcaacttcggct
aagcccgcgccagctaagccatcagcgcctaagcccaagcaactcaagcctaagccactc
aaacctaagcctaagcaactcaagcccaagccgctgaaaactcacccacttaaatctaaa
tcccagcgacttaagtcagctaaattactgccacttaagcacatatttaaaacgctaaag
aagcggattaattctgtcgccatcttgttagcggctcatgtaaagcgctgcagtttattc
tataaatggctcttaagcgtgtgcttgagcctgggactgcttgcaggctcaatctacttt
gccattgaagatctcaaagcctacccagagcaggggctcaaacttgaacaaaccactcaa
attaccatcaatgccggcatgtcagtcactaagttggtacagagcctagagcaacaaggt
gtggtcactgagagctggaaaatacggtacttggtgaagttaaggccagagctggcgcaa
attcgcaccggcctgtatgagatattccctacagatactttagagagttttttacagcgg
gtgcttagcggcaaagtggtgaccttcgccgtgaccttagtagaaggtaagtccattaaa
gagtggcaagcaagcctagagtcacagccgcgcttgagcctttctgaagcgccattttta
actgtacttaaggcgcacggcgatgacagtggcctgccagagggtaagttttacccagaa
acctatcattatcatgcggatgaggatgtggttgagctattgacccgcagctttgtaatg
atgcagtcggcgctcaataccgcctgggaagggcgcagcgatgacgtacaagtcaagagt
gcctatgaactgctaattctggcgtccatcatagagaaagaaacgggccaagccagcgag
cggccactcatttcggctgtgttcaataatcgcttgaagttaggcatgcgcctgcaaacg
gaccctacggttatttacggcatgggtgagcgctttaacggcaacattacccgtaaagat
ctgcaagaagcaacggcctttaatacttataaaataaatggcttaccgcccactccaata
gcagcgcccagtcaggcagccctagatgcagcggctcatcccgcggacgtggattattta
tattttgtctcccgtaacgatggcagccatgtgttttctaaaacactgaaagatcataac
gcggcggtaaatcaatatcagagaagaaagaaaaaatga
DBGET
integrated database retrieval system