Shewanella denitrificans: Sden_3386
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Entry
Sden_3386 CDS
T00344
Name
(GenBank) N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Sden_3386
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
Sden_3386
Peptidoglycan biosynthesis and degradation proteins [BR:
sdn01011
]
Peptidoglycan biosynthesis and degradation
Amidase
Sden_3386
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
ABE56662
UniProt:
Q12IR4
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All DBs
Position
complement(4040468..4041049)
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AA seq
193 aa
AA seq
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MEPKMNDGLSLTHGWLNEARHCLSPHFNARPNAEVSLLVIHNISLPAGQFGKPYIDQLFQ
GCLAIDADASFAELEGLRVSAHFLIRRDGELVQYVSCDDRAWHAGLSEFLGRQNCNDFAI
GIELEGTDSIPYSQAQYQCLTALTLVLMAQYPMISLDNIVGHCDIAPGRKTDPGESFDWA
AYRAELGASLARR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaagatgaatgacggattgagcttaactcacggctggttaaatgaagcgcgt
cattgtttatcgccgcactttaatgcgcgccccaatgctgaggtcagtctgctggttatt
cataatatcagcttgccagcagggcaattcggcaagccttatattgaccagttgtttcaa
gggtgtcttgccatcgatgccgatgccagttttgctgagcttgaaggtttgcgggtatcg
gcacatttcttaattcgccgcgatggcgagctagtgcaatacgtcagttgtgacgataga
gcttggcatgcggggctctctgagtttttgggtcgacaaaattgcaatgatttcgccatt
ggcatagagcttgagggcacagattctatcccctatagccaagcgcaatatcagtgctta
actgccttaaccttggtgttaatggcgcaataccctatgattagcctagataatattgtt
ggtcattgtgatattgctcccgggcgtaagacggatcccggtgaaagtttcgactgggca
gcttatcgagccgaattaggcgcgagcttggctagacgctag
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