Seriola dumerili (greater amberjack): 111217071
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Entry
111217071 CDS
T05606
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111217071 (trpc4)
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111217071 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
111217071
NCBI-ProteinID:
XP_022594489
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFFTCVFIGLLYPVFAFCYLILPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFWYLMCWIKRQVCKRTNSKRPETFGSLGRRAAENLRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMVKTGKPALPGAKASGSSVESS
LAYPNSSLKVSSCPQSSQVKSKLNRFKITTSILKQSSSTASPRPPESSNGLPNGLLSLVS
DETPSENSNQRKNFPKDITDFGLFQKRHWGGNEGTSGAGEISRKMYSLSEEAGESAGSDA
EEQVKEHTARGEDEREISKREKAEEATVTEAANEDSEVLNTNCSLEEDGEKETNEKDKES
LSCVDPVADGCLTGTCREEA
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctttactatcggcggactgacagctcctcataccgggaccgcatcccgctg
agaattgtgcgggccgagtcggagctgtcacccttggagaaagcctatcttggagctgtg
gagaagggggactatgcgagtgtcaaacaggctctggaggaggcggagatctacttcaag
atcaacatcaactgcatcgaccccctcggccgcacggctctgctaattgccattgagaac
gagaaccttgagatcattgagctcttgctgagcttcagcgtctatgtcggcgatgccctg
ctgcacgcaatccgcaaggaagtggtgggagctgtggagctgctgctaaatcacaagaaa
ccaagtggtggcatgcaggttcctcctatcttattggacaagcagttctctgacttcacc
cctgacatcactcccatcatacttgctgcacacaccaacaactatgaaattatcaagctc
ctggtgcagaaaggcgtgtctatgccacagccacatgaggtgcgctgtaactgtgtggag
tgtgtgtcaagttcggacgtggacagcctgcggcactcacgctcacgcctcaacatctac
aaagcgctgtcgagtccctcgctaattgcgctgtccagcgaggatcccttcctcactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagttcaaatcagag
tatgaggagctgtctcagcaatgtaaacagtttgccaaagacctcctagaccagacgagg
agctccagggagctggagatgatcctcaactacagagacgatatcaacttattggaggag
gagggcaacaatgacctggcaagactcaaactagctatcaagtaccaccaaaaagagttc
gtagctcagccaaactgccagcagctgttggcatcccggtggtatgatgagttccccggt
tggcggcggcggcactgggcagggaagttcttcacctgcgtcttcatcggcctcctctac
ccagtgtttgctttctgctacctcatccttccaaagagtcgttacggcctcttcatccgt
aagcccttcatcaagttcatctgccacacggcgtcctacctgacctttctattcctgctg
ctgctcgcctcccagcacattgtcaccacagagcaggaccggcaggataggcagggcccc
gcaccaaccaccgtggagtggatgatcctgccctgggtgctgggattcatctgggcagag
atcaagcaaatgtgggatggcggtttccaagactatgtccatgactggtggaacctgatg
gactttgtcatgaactctctgtacttggccaccatatccctcaagattgtagcctacact
aagtacagtggcagtaaaccgaggaaccagtgggaaatgtggcacccaactctagtagct
gaggcagtgtttgcaatagcaaacattttcagttctctgcgcctgatctcgctgttcaca
gccaactcccatctggggccgctgcagatctctctcgggagaatgctgctggacatcctg
aagttcctcttcatctactgtctggtcctgctggccttcgctaacgggctgaaccagctc
tacttttactacgagaccaaagcttcagacgagaaggggaaatgcaagggaatcagatgt
gtggagcagaataacgctttctccacgttgtttgagaccctgcaatctctcttctggtca
atctttggcctgatcagcctgtacgtgaccaacgtggacgcggaccaccagttcaccgag
tttgtcggcgccaccatgttcggcacatacaacatcatttcactggtggtgctcctcaac
atgctcatagccatgatgaacaactcctaccagcacattgctgatcacgcagacattgag
tggaagtttgccaggacaaagctgtggatgagttacttcgaagaaggggccactctgcca
gcccccttcaacatcatccccagccccaagtcattctggtacctcatgtgttggattaag
aggcaagtgtgcaagaggacaaactccaagcgtcctgaaaccttcggatctctcggaagg
cgagcagcagagaatctgaggataaaccatcagtatcaggaggtgctgaggaacttggtg
aaacgttacgtggccgccatgatcagagatgccaagacagaggaaggcttaactgaagag
aacttcaaggagctgaaacaagatatctccagttttcgttacgaggtgatgggcatggtg
aagacggggaagcctgctctaccgggggcaaaggccagcggcagctcggtggagtccagt
cttgcttaccccaattcctcgcttaaggtttcttcctgccctcagagcagccaggtgaaa
agcaaactcaatagattcaagatcaccacttccatcctcaagcagagtagttctacagcg
tcacccaggccaccagagtcctccaatggtctacccaatgggctcttgtccctggtgtct
gatgagacccccagtgaaaattcaaaccagaggaaaaacttccccaaagatatcactgac
tttggcttgttccagaaacgccactggggtggcaatgaaggcacgtcaggtgcaggagag
atttccagaaagatgtactctttatcagaggaagcaggggagtctgcgggctcagacgcc
gaggagcaggtcaaagagcatacggctagaggtgaggatgagagagagatctcaaagcga
gagaaggcggaagaagctacagttactgaggcagcgaatgaggatagcgaggtcttaaat
accaactgcagcttggaggaagatggggaaaaagaaaccaatgaaaaggacaaagagagt
ttgtcctgcgttgacccagtagctgatggatgtttgacaggaacatgcagagaagaagcc
taa
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