Seriola dumerili (greater amberjack): 111218218
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Entry
111218218 CDS
T05606
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
KO
K10849
DNA excision repair protein ERCC-1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03420
Nucleotide excision repair
sdu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111218218 (ercc1)
03460 Fanconi anemia pathway
111218218 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111218218 (ercc1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
111218218 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
111218218
NCBI-ProteinID:
XP_022596123
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MKKRFNIDLDDSAFTKERTPPKPRFLSSSKAGQTTSASSASSAAGSVDQLLSYAEYVVQS
KSNVAAAPQREAALKLPRTEGDGVTSLKQTECGSVSSATGRCATVQDCAKGNEGGSEGVQ
KKEEERVAGTDQEEANCQRSDARPCLGPKTVGSGSSIVVSPRQRGNPILKFVRSVPWEFG
DVVPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKQLGQTFTLRVLLVQVDVKDPHHALKE
LARICIMADCTLILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKNYLSKVTDCLTTVKS
INKTDAITLLSTFSSIEGIISASKEDLVLCPGLGPQKARRLYDVLHKPFLKSKTEDN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggtttaacattgacctggacgattctgctttcaccaaagaaagaacaccg
ccaaagccgcggtttctgtcttcatccaaagcgggacaaaccacatcagcctcatctgca
tcctcagcagcagggtcagtggaccagctcctgtcttatgcagaatacgtcgtccagagt
aaaagcaatgtggctgctgctcctcagagagaggctgccctcaaactccccaggactgaa
ggtgatggagttaccagtctgaaacaaactgaatgtggttcagtatcgtctgccaccgga
agatgtgcaacagttcaggactgcgctaaggggaatgaaggtggatctgaaggggttcag
aagaaagaggaggaacgggtggctggcacagaccaagaagaggctaactgtcaaaggtca
gatgcaagaccgtgcctgggtcctaaaacggtggggtcagggagcagcattgttgtcagt
cctcgacagaggggaaatcccattctgaagtttgtgaggagtgtcccatgggaatttgga
gatgttgtaccagactatgtgttgggacagacaacgtgtgctctcttcctcagtctgagg
tatcacaacctcaacccaaattatatccacgaccgtttgaagcagcttggacagactttc
actctgcgagtgttacttgttcaggtagatgtgaaagatcctcatcatgcattgaaggag
ctggctcgcatctgcatcatggctgactgcacactcatcttggcttggagtccagaggaa
gcagggcgttacctagaaacttataagtcgtatgaaaagaaacccgcagacctactgaag
gagcaagttgaaaaaaactatctgtcaaaggttacagactgtctaaccacagtaaagtct
ataaacaagactgatgccattaccttgctgtccactttctcgtctatagagggaatcatc
agtgcatctaaggaggacctggttctctgtccagggcttggaccacaaaaagcgagacga
ctctacgatgttctgcacaagcccttcctcaagtcgaaaacagaagacaactga
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