Seriola dumerili (greater amberjack): 111221545
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Entry
111221545 CDS
T05606
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111221545
03015 mRNA surveillance pathway
111221545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111221545
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111221545
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111221545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
111221545
NCBI-ProteinID:
XP_022600707
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKEKPEENGTASNATDSSSTAAKSEAEGENKSTDED
DKEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCLCVSPT
YELALQTGKVIEQMGKHYPEVRLVYAIRGNKLQRGSKLQEQIVIGTPGTMLDWCSKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcagtggacgaacaagaagccgcggcggaatcgatc
ggtagtcttcaaataaaagagaaacctgaagaaaatggcacggcttcaaacgcaacagac
tccagcagtacagcggcaaagtcagaagctgaaggagaaaacaagtcaacagatgaagat
gacaaagaggacaaagcggcacagtcattgttaaacaagctgatccggaataatcttgtc
aataatactaaccaagtggaagttcttcagaaggatcccaactctccgctctactctgtc
aaatcctttgaggagttgcgactcaaacctcagctacttcagggtgtgtacggcatgggt
ttcaaccggccatctaaaatccaggagactgccttacctatgatgctggctgaacctcca
cagaatttgattgcccagtcgcagtcaggaacagggaaaacagctgcctttgtcctggcc
atgcttagccatgtagaccccaacaacagatatccacagtgcctgtgtgtatcacccacc
tatgaactggcacttcagactggtaaggtgatcgagcagatgggcaaacactatcctgag
gtcagactagtctacgccatcagaggaaataaattgcagcggggctcgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgcagtaagttcaagtttata
gaccccaagaagatcaaggtgtttgtgctggatgaggctgatgtcatgatcgccacacag
ggtcaccaggaccagagcatccgcatccagaggatgctgcctaaaaactgccaaatgttg
ctgttctcagccacgtttgaagaaacggtgtggaacttcgcccagcgtatcgtgcctgac
cccaacatcatcaagctgaagagagaggaggagacgctggatactatcaaacagtactat
gtattgtgtaacagcaaggaggagaagttccaagcgctctgcaacatctacggcgccatc
accatcgctcaggccatgatcttttgccatacaaggaagactgcaggctggctggcaggg
gagctgtccagagaaggccaccaggtggcgctgctcagtggagagatgcaggtggagcag
agggctgctgtcattgaacgcttcagggacggcaaggagaaggtcctggttactacaaat
gtttgtgctcgaggtattgatgtcgagcaggtttccgtggtgatcaactttgacttacca
gtggacaaagatggtaaccctgacaatgagacatacctgcacaggattggccgcacaggt
cgatttggcaaaaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcaataaaaagattgaaaaactagacacggatgatctg
gacgaaattgagaaaatcgccagctaa
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