Seriola dumerili (greater amberjack): 111221858
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Entry
111221858 CDS
T05606
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111221858 (ap5b1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111221858 (ap5b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
111221858
NCBI-ProteinID:
XP_022601164
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MAVNWADRISAFSVSPSRFLSGTTAEAFLAELLRELRDDRASYSVKVLLLSPLCEYSTLL
CPSDSVGEETALELMSVFAQCPPKSAQFRCHLLLALSSVLVCTSCVSSRSRASQDFLDLL
LQISQDTGDLHGDGALHSLRVTACDCLRELEACSPGLLSQHVELLSGLRQRETFRLHQAF
AGLHTLVLRNAVYQLTQEKGAGAEQLKALLGGNTSVAWEAAQDSGLMNNKDSAILSSLIL
GPMGSVPTLHTGPDCKELRSVLSSLLEESYLLTPFCQAALLHRLTEVVAMVPGVPPAIFR
AQLLRLLGTSKVCLLHATLLMKCAFTDSLFSAEDEAFILKRLVVLSQHPLLSTPEKLFYM
DCILHFPENRPINCGDGDESLPVLMTPRLASALVPTVFNDSATMLARLNLLCLVYLEEGE
EVEGEEGEEGRGLAYLYEHLSSLLHIVKNGGNREIIVTFFRAAFLFLSYFYHMERYSNSL
TEKLCELYLHHTHLAPHLISLADQTQDRLSESNWAVELLRELQRVITSAPLTQLTLQDLG
WHLKMLARVAEEGKIPQRTTLSFLSGVITPSSSSLCVSGDWRLGNSILGVCRRLLVHPSL
DSLLIPLADVLQHLACRYGDTDIQDHARLYYTLLTTLSREKLAGVLAQGAIEGGRQVKKR
SLSSLMAESEGLTGVLTIHQMEKAIFSVVEVNSEPQTDKESVPNQNETQKCPDDVNTTLE
VYRSQFNNPAFASEITLSYQLVHTEAHDSRFDQLFSIRLHFSLTDDHYEELSDISVPCLF
RERPSPVVKLRLKPRRPHPTTLHASALLTTQDGLSWHAILPDIHVAFQQAFMPLPAPPAW
GRGGKLNLFEGLWDEFCSENEDCATSLFCCQLKEAALISLVEKHFLPYLISDLSHKEEFK
VLLFLPPQSHMLLKIRSEEDAVHFDIATDNWQLLPHLSSYLLTLTSSQEDTHS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactgggccgacaggatctccgctttctccgtcagcccgtctcgcttcctc
tccgggacaaccgccgaggctttcctggcagagctgctccgtgagctgcgagatgacaga
gccagttacagtgtcaaggtcctcctgttgtccccactatgcgagtactcgactctgctg
tgtccctcagactctgtgggtgaggagacagccctggagctcatgtcagtatttgcccag
tgtcctcccaaatccgcacagtttcgttgtcacctcctcctggccctctcctccgtgctc
gtctgcacttcctgtgtgagcagccgttcccgtgcatctcaagatttcctggacctgctc
cttcagatatcccaggacactggtgacctccatggtgatggcgctcttcattctctccgg
gtcacagcttgtgactgtttgcgtgagctggaagcctgctctcctggtcttctctcccag
catgtcgagctcttgagtgggctcaggcagagagaaaccttcaggttacaccaggccttt
gcgggacttcatactctggtgttgagaaatgctgtgtatcagctcacccaggagaaagga
gccggtgctgagcaacttaaagctcttctaggagggaatacatcagttgcatgggaagca
gcccaggactcaggcctgatgaataacaaagactcagccatcctgtcttctctcatcctg
gggcccatgggttcagtgcccaccctccacactgggcctgattgtaaggagttgcgttca
gtcctgtcctccctcctcgaggagtcctacctcctcactcctttctgtcaggctgcactg
ctacacagactgacagaggtggttgccatggtgcctggtgtccctccagccatatttaga
gctcagctgctgcgactgctcggcacgagcaaggtctgtctcctccacgccactctgctg
atgaagtgtgcgttcacagacagcctgttcagcgcagaggatgaagctttcatcctcaaa
cgactggtcgtgctctcccagcatcccctgctgagtacgcccgagaagcttttctacatg
gactgtatcctgcacttccctgagaaccgtcccatcaactgcggcgacggtgacgagtcg
ctccctgtgctgatgactccccggctggcctcggctctagtgcccaccgtgttcaacgac
agcgccaccatgctggcccggctcaacctgctgtgtctggtctacctggaggagggagag
gaagtggagggggaagaaggggaggagggcagggggttggcctacctttacgaacacctc
agctcgctgctgcacattgtgaagaacggaggcaacagagagatcattgtgaccttcttc
agggccgccttcctcttcctctcgtacttctaccacatggagcgctactctaacagcctg
actgagaagctgtgtgagctctacctccaccacacccacctagccccacacctcatcagc
ctggccgaccagactcaggaccggctctctgagtctaactgggccgtggagctcctcaga
gagctgcagagagtcatcactagtgcaccgcttacccagctcaccttgcaagacctcggc
tggcacctcaagatgctggcacgcgtggcagaggaaggaaaaatcccccagcgcaccacc
ctcagctttctgtccggcgtcatcactccatcgtcctcctcgctgtgcgtgagcggcgac
tggcgcttggggaacagcattctgggagtttgccgccgcctgctcgtccaccccagtctg
gactcgctgcttatccctctggctgacgtcctgcagcatcttgcctgccgctacggagac
acagacatccaggaccatgcccgtctttactacaccctcctcaccacgctgtcccgggag
aagctggcaggggtgttggcgcagggtgcgatcgagggggggcgtcaggtcaagaagcga
tcgctgtcgagcctcatggccgagagcgaggggctgacgggcgtgcttaccattcaccag
atggagaaagccatattcagtgtggttgaggtgaattcagagccacagacagataaagaa
agtgtcccaaaccagaatgagacacagaaatgtccagatgatgtgaacacaacactggaa
gtctaccggagtcagttcaacaaccctgccttcgcctcagaaatcaccttaagctaccag
ctggttcacactgaggctcacgactcgcgcttcgatcagctgttcagcatccgcctgcac
ttcagcctcacagatgaccactacgaagagctgagcgacatcagtgtcccctgtctcttc
agagagcgaccgtcgccggtggtgaagctgagactgaagccgaggcggccacaccccacc
accctccacgccagcgccctcttgaccacccaggatgggctctcctggcacgccatcctc
ccggacatccacgtggccttccagcaggccttcatgcctctgcctgctccgccggcctgg
ggacgaggcggcaaactaaacctgtttgagggattatgggatgaattctgctcagagaat
gaggactgcgctaccagcctgttctgctgccagctgaaggaggcggctctgatttctttg
gtggagaaacacttcctcccctacctcatctcagacttgtcccataaagaagagtttaaa
gtgcttctcttcctccctccacagtctcacatgctgctgaaaatcaggtctgaggaagac
gccgtgcacttcgacatcgccacagacaactggcagcttttgcctcacctgagttcttat
ctactgacacttacatcttcacaggaagacactcacagctga
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