Seriola dumerili (greater amberjack): 111225715
Help
Entry
111225715 CDS
T05606
Name
(RefSeq) human immunodeficiency virus type I enhancer-binding protein 2 homolog
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111225715
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111225715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-H2C2_5
DUF4320
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
111225715
NCBI-ProteinID:
XP_022606458
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MSDSGKSLQLEDQHSQTQSTSHPEYEMSSYPLQSTKHFPIGRQKAVGHLVSAQSPGPASH
RKSPSSPEVQQHSGMDQLSETVCKVEQKPQKPGKYVCDYCGRACAKPSVLKKHIRSHTGE
RPYPCVPCGFSFKTKSNLYKHRKSHAHSVKAGTVPFSELGSYNANTDQGSFEGEGELFSD
AEQSTDTDEDTLNDPLLLLDSPVEGSDNTAVKVLNLIAQKKGATSMSAQDGSSQPQEINA
PPAAAEASRAIQSCTIKQRLALRLSEKRSSDSDHNLSLPSQSSKGSTDSGYFSRSESAEH
QTGPPNTNAKSYQEIMFGKCYRPSPKQTTAFVACSTDSSEYAGKRSEKGVSRVFTQEKDT
VESIKINTKSFTREEVKEPQLDAGSDMGPLIRSNSMPTSSAVCLTMPQALRGSHSFDERA
STGGMRRLRRQAAFELSAHDGHGDTDNHGKMSECGISPSGLEMENYPSMPSNMSHQRHAM
ELATRKRRKEKREEEDLPSRYEDLHEQCEEMFDSSKDYDSKQAALGIIALGKGHSSSMLT
QMDRCDMDISMSPEISGRKTLGNVISVIQHTNSINRPHSEQSESYKYHGQRQEGISSFQA
MEASELYEMERSDSRLRQSFQMGPKLVRQPNIQVPEIRVTVEPDSPEKAPEVQVKEPEKH
VEEFQWPQRSETLAQFPPEKLPPKKKRLRLAEIEHSSGESSFESACTSLSRSPSQDSNLS
YSSTFSFDREESLKSVSPARQDEFGKPLELLAVPGSGHSLSVLNQRQQHEMRRSSSEQAP
CNLRKEFPEVRSISFDYGSLSPTSKVRHVDISGGHSAVKERRRGNLVRQESLNMDTEVTQ
VQSQVFPQYLSSTSPPFTALAVLPQTLPIFSTGNTFPQLSHPSLLVPVRIQTHVPSYGSI
TYTSVSQIFDNQYDSVSSTTATTQHQTRLSGNLDSHNALAYTRPPSTHSLNVEALDLSSA
KLKTGIPLSLTSRTISTTNASSGGANKRMLSPASSLDLFMEVKQQKRVKEERMFGQIVEE
LSAVELGKCNLSEEKGQRSEMQGASIPDSCRSTFITLQQKVTEATDHAVESAMESSSLET
SLPPYSMISVREMKEVGMEKRVQMDMVAQLVTSQDILISDTEHSRLLSQFPSLRTTTGVS
WCYLNYTKPSCSHSSSPLSSVYTTWCVSSHNPNPLELSTSAALALLRSKQKGDKVIYTVA
AMCQPGTGKLVSSLILWRQTMEQLQRKPEPKEVDITYGKKVKDIGCRVKTAKEEWKEREA
STAQTVPTRIKIFEGGYKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVR
PYICRVCNFAFKTKGNLTKHMKSKAHMKKCLELGVSVTMDETEIQEHVDDIQQESKTEVT
VTTKHQFSDAEESDGMDEEADEIDEDDDEDDEYEGDSTPKLRSRSTSPQACGVTSLSVTA
TAAIHGCSLTSLPGTDVRQQPSGRRTGSDHRPVLTTDQREKSVDEDSLTMLSPDQASFLF
DPYSSCLLSPGWESPIREPSPSRLRYPSPRRELSPRGRSSPRWDTSPLRPGSPGFTPIQH
LSPVSMERPMSPGSELVGKRESSVRGRQRVVLRAVSPRRGSHQHKGSGDKTRHQAKMEMA
QQQGAFEMEMDQRSCLASTLPGSASSHHQNILSHLPLHSQQQAHSLLPVVPVGGLQMLHS
PPSPSTDVTPSSAPSPQSSEGQRCSSREGSVHGLETGGEDIRGQNQLSTHQAAQEKSLIP
GVGDSRQEENVQTCLKAIASLKITTEDPH
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcagggaaatcactgcagttagaagatcagcactcccaaacccagtccaca
agccatccagagtacgagatgtcttcatatccactgcagtccacaaaacattttcccatt
ggcagacagaaagctgtaggtcacttagtttctgcacagtccccgggacctgcatctcac
aggaagtcccccagttcacctgaggtccaacaacattcagggatggatcagctgtcagag
actgtgtgtaaggtggaacagaaaccacaaaagcctgggaagtatgtttgtgattactgt
ggaagggcatgtgccaaacccagcgtgcttaagaaacatattcgctcacacaccggggaa
cggccctatccatgtgtcccctgtggattctccttcaaaaccaaaagtaatttatacaaa
cacagaaagtctcacgctcactcagtcaaagctggaacagtgccattctcagaacttggt
tcttacaatgccaatacagaccaggggtcttttgaaggggaaggagagttattctctgat
gctgagcaaagcacggacacggacgaggacactcttaacgacccgctgctgctgctggac
tctccagtggagggatcagataacactgctgtaaaagtactaaatctcattgctcagaaa
aagggagccacgtcgatgtcagctcaggatggttcatcccaaccccaagaaatcaatgca
cctcctgccgctgctgaggctagccgtgcaattcaatcttgcacgatcaaacagaggctt
gcacttcgtttgtctgaaaaaagaagcagcgactctgaccacaatttgtcccttccaagt
cagtctagcaagggcagcacggactccggctacttctcgcgctccgagagtgccgagcac
cagaccggtcctccaaacaccaacgcaaagtcctatcaagaaattatgtttgggaagtgt
tacagaccaagccctaaacagacgacagcttttgtggcctgcagcacagactcaagcgaa
tatgctgggaaacgctcggaaaagggtgtttcccgtgttttcacccaggagaaagacact
gttgaatccatcaaaataaacacaaagtctttcacgagggaggaggtcaaagaaccccag
ttagatgccggctccgatatggggcctctgatcagaagcaactcaatgccaacatcctca
gcagtgtgtctgactatgcctcaagccctcaggggcagccactcgtttgatgagagagca
agcacagggggcatgaggagactcaggcggcaagctgctttcgaactctccgcacatgat
gggcatggagatactgacaaccacggaaagatgagtgagtgtggcatttcaccctcagga
ctggaaatggaaaattacccctctatgccgtctaatatgagccatcagagacatgcaatg
gaattggcaacaaggaagcgtcggaaagagaagagggaagaggaggatttgcccagtcga
tatgaggaccttcatgaacagtgtgaagaaatgtttgattcaagcaaggactacgactca
aaacaagctgcattgggcattattgctttagggaaaggacattcttcaagtatgctaaca
cagatggacaggtgtgatatggacatatcaatgagccctgaaatttctggtcgtaaaacc
ttagggaatgtaatctcagttattcagcatacaaactcgataaacaggcctcactctgaa
cagtcagaatcctataagtatcatgggcagagacaggaaggtatttcttcatttcaggct
atggaggcaagtgaattatatgagatggagaggagtgatagtagactacggcaatcattt
caaatgggccccaaacttgtgcggcagccgaacatacaagtcccagagattagggtcaca
gtagagcctgacagtccagaaaaagctccagaggtgcaggtgaaggagccagagaagcac
gtggaggagtttcagtggcctcaaaggagtgaaactttagcacaattccctccagaaaaa
ctcccaccaaagaagaaacggctacgcttagctgaaatcgagcactcctctggcgaatct
agttttgagtctgcctgcaccagtctctctcgtagcccgagccaagacagcaacttatct
tatagctccaccttctcctttgacagggaagagagcttgaagtcggtctctccagccagg
caggatgaatttggcaaaccactagagctcttagctgtgccagggagtgggcactccctc
tctgtgctcaaccagcgtcaacaacatgaaatgagacgctcctcctcggagcaggcgccg
tgtaacttgcgcaaggagttcccagaggtacgcagcatatcatttgactatggcagtctt
tctccaacatccaaagttagacacgtggacatcagcggtggtcactccgctgtgaaggag
agaaggaggggaaacttggtgcgtcaggagtcattgaatatggacactgaagtaacacaa
gtccaatcacaagtgtttccgcagtacctcagcagcacctcccctccattcacagcactt
gctgttctgccgcagaccttgccaatattttccactgggaatacatttccccagctttcg
catccaagcctgttagttcctgtaagaatacagactcatgtgccatcctatggcagtatc
acatacacctcagtatcacagatttttgacaatcagtatgacagtgttagctccactaca
gccaccactcaacatcaaacacgtttgtctggaaatcttgattctcataatgcattagct
tataccagaccaccctcaacacacagcctcaatgttgaagcccttgatttgtcatcagct
aagctcaagacgggcatccctctttctttgacttctagaactatctcaaccactaacgcc
tccagtggtggtgcaaacaaacggatgctatcccctgccagcagcctagaccttttcatg
gaggtcaagcagcaaaaacgcgtgaaagaggaaagaatgtttggacagattgtagaggag
ctgagtgctgtggagttgggaaaatgtaatttgagcgaagagaaggggcaaaggtcagag
atgcagggtgcatccatacctgactcatgtaggagtacatttatcacacttcagcaaaaa
gtgacagaggccactgaccacgccgtcgagtcagccatggaaagtagctctctggaaacc
agcttgcctccctactccatgatatcagtcagagaaatgaaagaagttggcatggagaaa
cgagtgcagatggatatggtggcacagctggttaccagtcaagacatcctgatctcagac
accgagcattcaagactgttatctcagtttccaagtctacgcacgacgacaggtgtgagc
tggtgttacctcaactacaccaaaccgagctgctctcacagcagctcccctttatcatcc
gtgtacaccacctggtgtgtgagttcccacaacccgaaccctctggagctgagcacgagt
gctgctctggctctgctgcggtccaaacagaagggagacaaggttatatacactgtggca
gccatgtgtcagcctggcacggggaaactggtttcatccctcatcctgtggaggcagacc
atggaacagctgcagaggaaaccagagcccaaagaggtggacatcacctacgggaagaag
gtgaaagatattggctgcagagtgaaaactgccaaggaggagtggaaagagagggaggct
tccacagcgcaaacagtgccaacacgtattaagatcttcgagggagggtacaagtccaat
gaagactatgtgtatgtcagaggtcggggccgggggaaatacatttgtgaggagtgtggt
attcgttgtaagaagccaagcatgctgaaaaaacacattcggacccatacagacgtgcga
ccatacatctgcagggtctgcaactttgcttttaaaactaaaggaaacctgactaaacat
atgaagtcaaaggcgcacatgaagaaatgtcttgaactgggagtgtcagtgacaatggat
gagacggagatacaggaacatgttgacgacatccagcaagagtctaagacagaagtgacg
gtcacaaccaaacatcagttctcagacgcagaggagtctgacggcatggacgaagaggct
gatgaaattgacgaagatgacgatgaggatgatgaatatgaaggcgactccactccaaag
ttgcgttcaagaagtacaagtcctcaggcgtgtggagttacttctctgtcagttacagcc
accgctgctatccatggctgctccctcacctctctgcctggcaccgacgtccgccaacag
ccctctggcaggcggacaggctccgaccatcgacctgtcctcaccaccgaccagagagag
aagtctgtggatgaagactctttgaccatgctgtccccagaccaggccagcttcctgttt
gacccttactcctcttgtctgctctcgcctggctgggagtctcccatcagggagccttcc
ccttcacgtctgcgttacccatccccacggcgagagctctccccgcgaggtcgctcctct
cccaggtgggatacctccccgctgaggcctggctcacccggcttcacacccattcagcac
ctctccccggtctcgatggagcgaccaatgtctcctggatcagagctggtcggaaagcga
gaatcgtcagtcaggggccggcagagggttgtgctgagagccgtttcaccacgtagaggc
tcgcaccaacacaaaggcagcggtgacaaaaccagacaccaagcaaagatggagatggct
caacaacaaggagcatttgaaatggaaatggatcaaaggagctgcttggcttctactctg
cctggttctgccagttctcatcaccagaacatcctcagccacctcccactgcactcccag
cagcaggcccacagtttgctccccgttgttcctgttggagggctccagatgttgcactct
ccgccttcccccagcactgatgtcaccccctcctcggcgccgagcccccagagcagcgag
ggccagcgttgcagcagcagagagggatctgtccacgggcttgagacgggaggagaggac
atcagaggccagaaccagctgtccacccatcaggccgctcaggagaaaagcctcattccc
ggcgtcggggacagcagacaggaggaaaacgtgcaaacctgcttgaaagccatcgcctcg
ctgaagatcaccacagaagaccctcattaa
DBGET
integrated database retrieval system
