Seriola dumerili (greater amberjack): 111229706
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Entry
111229706 CDS
T05606
Symbol
zc3h18
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111229706 (zc3h18)
Spliceosome [BR:
sdu03041
]
Common components
Common spliceosomal components
General mRNP proteins
111229706 (zc3h18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
111229706
NCBI-ProteinID:
XP_022611867
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MDSPESPTQSPQSPEEEEKGLSDCELLDSSDEEEDRVISGSEIIREEENGGLVDEDEEEE
VMMSRGRTLNLEEEIEGEDEVVPDFISDEEPGGIGQEDETIMLMEGDDDGPQGGQLDGVE
EKEEEEEEDRVIDTPQSPDSEPEQVKSFTDEDNGEDREQGYSVSGYRKGASAEPDPVEVD
DEEDKSKAEEEEEDERIRVEEAERRRAAVKEMKDDSASVSRELDEHELDYDEEVPEEPSI
PPHEEEEDEEDAEEEESEDKSIKKKEKKPILPPSPRNNESKRTDDSKGPERMGRDSFRDK
KKDEDDGEIDEGEIDDDDLEEGEVKDPSDRKIRPRPICRFFIKGNCTWGMNCRFIHPGVN
DKGNYSLISKPDLFSPNGGPPGGPHPLIPNNPWAAPAVEELPPPPPPVEPPVESAWERGL
RHAKEVLKKATIRKEQEPDFEEKRFNVTIGEDEREFDKENDFFRERSYRIIRDEMDFRDP
IYGDPYNDPYYDYEMEALWRGGQYENFRVQYTEAPLPYHYSERERDRDPQERHRDRERER
DHRERERRQREREREREREREKERMRRKEEWERDRMKRDEKERPRMRPPRDAREKKDEDK
LKPRSPLSLPPNRPMEPPSKKEVVPLMRRPDEWKDPWRRSKSPRRRPGLGSPPRGRRRHR
PSGSSVSLSNSSRSSSRSSSYTGSGSSRSRSRSSSFSSYSSHSSQRSSFSGSRSRSRSFS
TSPSSSPTALRNAKNKPELSPMLAKGVPLKPGAMPPPRRDKPPMKKAPSPPPPGGPQGRP
SKPMLEGGKPPTNPREAGGAGGGASGSGAGRPPPPREPGKPPNPREGRRKERQQHPPRRR
TVSGSVSGTGSSYTGSSSRSRSSSNSLSRSRSGSRKSRKSRSLSVSSVSSVSSASSSSSS
VRSADSDDMYADLASPVSSASSRSPTPNHPRKERGAVRDRPPHGRDKNRERPSKKDEPFR
EDRRKIDPSGAPPRGGNPVPRSGPGSRGGHPVHPPPGAMGPPGSYGGSGSHKDIKLTLLN
KQGDKGNRKRYLPSDKDRPGSPASKRMAMSPDRGRDKRIPGRPPLSPRMDRPRGQGPRPL
PPHGDRKRPLSPAPKSSGKAPTAPSGKPATPGSASAAGAGSSSGSGSNKPSNTLSRREEL
LKQLKAVEDAIARKRAKIPAK
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggattctcctgaaagccctacccagtcccctcagtctcccgaggaggaggagaagggc
ctgtctgactgtgagctgctggattcttctgatgaagaggaggacagggtcatttcaggc
agtgagatcatccgtgaagaggaaaatggagggctggtggatgaggacgaagaggaagag
gtgatgatgagccgaggaagaactttgaacttagaggaggagatagaaggagaggatgag
gtggtccctgactttatctctgatgaggagcctggagggatcgggcaggaggatgagacc
attatgctgatggagggggatgacgatggtccgcaggggggccagttggatggggtggag
gagaaggaagaagaagaggaagaggatagagtcattgacaccccacaatctccagactca
gagccagaacaggtcaagagcttcactgatgaagacaatggagaagatagggagcaagga
tacagtgtcagtggctacagaaagggtgcctcagcagagcctgatccagttgaggtggat
gatgaggaggacaaaagcaaggcagaggaggaagaggaggatgaaaggataagagttgag
gaagcagagagaagaagagctgccgtgaaggagatgaaggacgactccgcatccgtttcc
cgggagctggatgagcatgaactggattatgatgaggaggtcccagaggagcccagcatc
cctccacacgaggaagaggaagatgaagaagatgcagaagaagaggagagtgaggacaag
agcattaagaagaaggagaagaaaccaatcctccctccatctcccagaaacaatgaatct
aagagaacagacgattccaaagggcccgagaggatgggcagagattccttcagagacaag
aagaaggatgaggatgatggagagattgatgaaggagagattgatgatgatgacctggag
gagggggaggtcaaagatccctcagacaggaagatcagaccacgtcccatctgcaggttc
ttcatcaaaggaaattgtacttggggtatgaactgtaggttcatccaccccggagtcaat
gacaaaggtaactattccctcatcagtaaaccagacctcttctcacctaatggagggcct
cctggaggaccacatccactcatacccaataatccctgggctgcgcctgcagtggaggag
ctccctccccctcctcctccagtggagcctcctgtggagagtgcctgggagagaggtctg
aggcatgccaaagaggtgctgaagaaggccaccatccgtaaggagcaggagccggacttt
gaggagaagcgtttcaacgtgaccattggagaggatgagagagaatttgacaaagagaac
gactttttcagagaacgcagctaccgcatcattagagatgaaatggacttcagagatcca
atctatggtgacccatataacgatccatactatgactatgaaatggaggccctttggcga
ggtggccagtatgaaaacttcagagtgcagtacacagaagctcctcttccttaccactac
agtgagcgcgaacgcgaccgcgaccctcaggagcggcatcgggacagagaaagggagcgg
gatcaccgtgagagggagcgccggcagagagagagggagagggaaagagagcgggaacgc
gagaaggagcgaatgcgacggaaagaagagtgggagagggaccggatgaagcgggatgag
aaggagaggccgaggatgcgtccgcctcgagacgccagggagaagaaagacgaggacaaa
ctgaaaccacgctctcccctcagcttgccacccaacaggccgatggagcctccctcaaag
aaggaggttgttcctttaatgaggcgaccagatgagtggaaggacccatggcgtcggtcc
aaatcgccaaggagacgtcctgggttgggctctccaccacgaggccgccggagacatcgg
ccctcaggctcctccgtctctctgtccaattcctccaggtcttcatctcgctcttcatcc
tacacaggctccgggtcgtctcgttctcgcagccgctcctcttcgttcagctcctactcc
agccactcctcccagcgcagctccttcagtggcagccgctccaggtctcggtcattctcc
acatctccctcttcgagcccaacggcactgaggaatgcaaagaacaaaccagaactttct
cctatgttagctaaaggagtaccgctgaagccgggtgccatgcctcccccacgcagggac
aagcctcccatgaagaaagctcccagtcctcctccacctggtggaccgcagggcaggcct
tccaaacccatgctagagggagggaagcctcccaccaatccccgggaggctggaggcgcg
ggtggcggggctagtggtagtggagcgggaagacccccgccaccacgagaacctggaaag
cctcccaacccgagggagggaaggcggaaagaacgacagcagcatcctcctcggaggcga
actgtgagtgggagtgtcagtggaactggtagcagttatactggttctagctccagatcc
agatcctcgtccaactccctctcacgctcgcgctctggatccagaaaatccaggaaatcc
agatcgctgagtgtgagcagcgtgtcgtcggtgtcatcagcgtcgtccagcagcagctct
gtgcgtagcgcagactcggatgacatgtacgctgaccttgccagcccggtgtcctcagct
agctcccgctcgccgacaccaaatcacccccgcaaggagcgaggagctgtgcgggaccgg
cctccacatggaagagacaagaacagggagagaccatcaaagaaagatgaacccttcagg
gaggatcgcaggaagatcgacccatcaggtgccccacctagaggaggcaaccctgtgccc
agatcgggacctggtagcaggggtggccaccctgtacatcccccacctggtgccatgggc
ccccctggaagctacggaggttcaggatcccacaaagacatcaaactcaccctcctcaac
aagcagggagataaaggcaacaggaagagatacctgccttcagacaaagacaggccaggt
tctcccgccagcaagaggatggccatgtctccagacagaggccgtgataaaaggatacct
ggccgacccccactctcccctcgaatggatcggcccagaggccaagggccgcgacccttg
cccccccacggagacagaaaacgtcctctgtcaccagcccccaagtcatctgggaaagcc
ccaacggcgccatcaggcaagccagccacccccggctctgcttcagcggccggtgcaggc
tccagctcagggtcaggctccaacaaacccagcaacacactgtcccgccgtgaggagctg
ctgaaacagctgaaggctgtggaagacgccatcgctcggaagcgagcaaagatccccgcc
aaatag
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