KEGG   Seriola dumerili (greater amberjack): 111230127Help
Entry
111230127         CDS       T05606                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    111230127 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdu03036]
    111230127 (setdb1)
Enzymes [BR:sdu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     111230127 (setdb1)
Chromosome and associated proteins [BR:sdu03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     111230127 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111230127 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Tudor_4 DUF5604 TUDOR_5 Pre-SET MBD
Motif
Other DBs
NCBI-GeneID: 111230127
NCBI-ProteinID: XP_022612443
LinkDB All DBs
Position
Unknown
AA seq 1252 aa AA seqDB search
MESSEGMEVEGWDSSLEEELGVSLDELKKWIEEAVEKSEIVQKKKAQLTELKKWVEQKEK
DEAMTEMLLSDASQSIVECEKLVKATYQKNGLVYRESSSEDEGGGGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKPVTTSKDPVLKEASAALQKTSHQVQKLVQMVNKPSPGTQLLRSPG
HPPSQSGIQGSVPAVFVSQVSSQSMAQPNPNMAEDELRVGMSILGKKRTKTWHRGTLVAI
NPVGNGIFKYKVKFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPLKRTWEDIEDGSCRDFIEEYITAYP
SRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPAKTPQATLSQPSQTPQ
NQQHQQHQQRPQPPQPQQTQQTQQSPQPVHPVQPPRVDNKHQMAKKSTSPFVPGVGGTHA
SKVMQALSPSPSNLPGIRLLNAPNTPMPTFTQSYQRQLPTLAPAPPSMTHAMATIPHQPS
YRAPTDRIFYLAHTCQPACLNRIRPAKADMHRGKNPLLTPLLYDFRRMTGRRKVNRKMSF
HVIYKAPCGLCLRNMAEIQHYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDIT
GGKEDIPLSCVNEIDSTPPPKVDYSKERIPEDGVFINTSSDFLVGCDCTDGCRDKSKCSC
HQLTLQATGCTPGGQINPNAGFLHKRLEECLPTGIYECNKRCKCCVQMCTNRLVQHGLQV
RLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESV
ENFKEGYESEAHCSDSEGSGVDVSRIKIQPSALVSSNPVGRPPRKGESKSKAQSSSSSDD
SNDDDDKDSKSEDESDSSDDTFVKENYYSSSSVWRSYTTRGQVKGNKEGSQDSKDGLSAS
ARGTDDEKPPSIPEETGKSKVASWLTSQGLKKESGDSKSPVKPETGKKQDVMTLSDSDDV
QTISSGSEDNKEREKVTPGVTKKQVAVKSTRGIALKTSHGLMVKTGAPGGVGGPGGQGGK
TGQQGQTGGGAENTPKNTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDT
HDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq 3759 nt NT seq  +upstreamnt  +downstreamnt
atggaaagcagtgaggggatggaggtggagggctgggactccagtctggaggaagaattg
ggcgtttctctggatgagctgaagaagtggattgaagaggctgtggagaagagcgagatt
gtgcagaagaaaaaggctcagctgacagagctcaaaaaatgggtggagcagaaagagaag
gatgaggcgatgacagagatgcttctcagtgatgccagccagtccatagtggagtgtgag
aagctggtaaaggcaacctaccaaaagaatggtcttgtttaccgggagagcagctcagag
gatgagggcggtggaggaggggtgttgtcctctgaggttattgaaatagacgacgatgat
gacgatgatgtcattgctgttggctgtttggttcctccaaagaagcctgtcactacaagc
aaagatccagtgttaaaagaggcctctgcagctctacagaaaacctctcatcaggtgcag
aagttggtccaaatggtcaacaagccttcaccaggtactcaattgcttcgatctccagga
caccctccatcccagtcaggtattcagggttctgttccagcagtgtttgtgtcacaggtt
tcatctcagtccatggcccagccaaacccaaatatggcagaggatgagctcagagtcggg
atgagcattctgggaaagaaacgcaccaagacctggcacagaggcaccctcgttgctatc
aaccctgttggaaatggtatattcaagtataaagtgaagtttgataaaggaaagagtctg
ctgtctggaaatcatgtggctttcgactataaccccaccctggagagtctgtatgtcgga
gcccgtgtagtggccaagtacaaggacggaaacctggtgtggctctatgctggaatagta
gcagaaatgccgaacaacaaaaaccgcatgaggtttctaatattctttgatgatggttat
gcttcatatgtgacactacctgagctctaccctgtttgccgaccattaaagcgaacttgg
gaagacatagaggacggatcatgtcgagacttcatcgaggagtacatcacagcctacccc
agcaggcctatggtgctcttaaaggtcggccagataatcaagacagagtgggagggaacc
tggtggaagagcaaagtggaggaggtggatggcagcttggtcaagatcctcttcttggat
gataagaggagtgagtggatctatagaggctccaccaggttggagccaatgttcaacctg
aagatgaccacagccaacactcaggagaagaagctggctggccagcagaggacaagacct
aatatgggggcgttgaggagtaaaggcccagtggttcaatacacaagtgacggacatgtt
ggagcttctcctgccaaaacgccgcaggccacactgagccagccttcacagacaccacaa
aatcaacaacatcaacaacatcaacagcgtccacaacccccacagccccaacaaacacaa
caaacccaacaaagccctcagcctgtacatcctgtacaacctccacgtgtcgacaataaa
catcagatggcgaagaagagtacttctccgtttgtccctggcgtaggaggcacacatgcc
tctaaagtcatgcaggctctttcccccagtcccagcaacctgccgggtataagattgttg
aatgccccaaatactcctatgcccactttcacacaatcgtatcaaagacagctgccaact
ctggctcctgccccgccttccatgacccacgcaatggccacaatcccccatcagccctcc
tatcgcgccccgacggaccgcatcttctacctggctcacacgtgtcagcctgcctgcttg
aatcgtatccgacctgctaaagctgacatgcacagaggaaaaaaccccctcctcacaccg
ttactgtacgatttcaggcgcatgactggacgacgcaaagtcaaccgcaagatgtccttc
cacgtgatttacaaggctccatgtggactctgtctgcgtaatatggcagagatccagcac
tacctcttccagacgcgctgtgactttatattcttagagatgttctgtctagacccctac
gtacttgtggaccggcccttccagccacagaggccgttctattacattccagacatcact
ggtggaaaggaggacatcccactttcctgtgtcaatgagattgattccaccccgcctcct
aaagtagactacagtaaagagcgtattcctgaagatggagtattcatcaacaccagttca
gacttcctagttgggtgtgattgtactgacggctgtcgagacaagtccaaatgttcgtgc
caccagctgacccttcaggctacaggttgtacaccgggggggcagatcaacccaaatgcc
ggatttttgcacaaacgattagaggagtgccttcccacaggaatctacgagtgcaataag
cgatgcaaatgttgtgttcagatgtgcaccaaccggcttgttcagcacggcctgcaggtg
cgtctccagctcttcaagacccagaacaaaggatggggcatccgctgtctggatgatgtg
gcgaagggctcttttgtctgcatctatgctggtaaaatcttgacggacgactttgcagac
aaagagggtttagaaatgggtgacgagtattttgctaatctggatcatatagagagtgtg
gaaaacttcaaggagggctatgagagcgaggctcactgttcggacagtgagggaagcggt
gtggacgtttccaggataaaaatccaaccatctgctttagtatcatctaaccctgtgggg
cgaccgcccaggaagggtgagtccaaatccaaagcccaaagctcaagctcatcagacgac
agcaatgacgacgatgacaaagactcgaagagtgaagatgaaagcgacagttcagatgac
acgtttgttaaggagaactactacagctccagctctgtgtggaggagttacaccacacgt
ggtcaggtcaagggcaacaaggaagggagtcaagacagtaaagatggactgagtgcctca
gccaggggaaccgatgacgagaagccaccgtccataccagaggaaacggggaaaagcaaa
gtggcttcctggttaacaagccaggggctgaagaaggaatccggagacagcaagagtcca
gtgaagccagaaacggggaagaagcaggatgtgatgactctctctgacagcgatgatgtt
cagaccatcagctctggatctgaagacaacaaggagagagaaaaagtcaccccaggtgtg
actaagaagcaggtagcagttaaatctacacgtggcattgccctgaagaccagccatggt
cttatggtaaaaacaggtgcacctggaggtgtgggtgggccgggtggtcagggaggaaaa
acagggcagcagggacagactggaggaggcgcggaaaacactcccaaaaacacccgccag
ttctttgacggggaagagtcgtgctacatcatcgatgccaagttagaaggaaaccttggg
cgttacctgaatcacagctgtagtcctaacctttttgtccagaatgtgtttgtggacaca
catgatttgcgattcccctgggtggcattctttgccagcaagcgaatccgggccggcaca
gagctgacctgggactacaactatgaggtgggcagtgtggagggtaaagtgctgctctgc
tgctgtggatccaccgagtgcagaggaaggctactgtga

DBGET integrated database retrieval system