Streptomyces davaonensis: BN159_4941
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Entry
BN159_4941 CDS
T02518
Name
(GenBank) extracellular RHS repeat protein
Organism
sdv
Streptomyces davaonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PT-HINT
RHS_repeat
Hom_end_hint
Hint
SpvB
Vint
Ribonuclease
AXH
Motif
Other DBs
NCBI-ProteinID:
CCK29320
UniProt:
K4R8G5
LinkDB
All DBs
Position
5490736..5497872
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AA seq
2378 aa
AA seq
DB search
MSVIAAALLVGLLPAQSLALPPDPAKEETGRESLTLEALKRDVPVPGMKVLSRHLETLRG
QIPKDQVAPEAGTVTPPSNVSGSVTFGSTTTPASTRTTAQQVALSPVGSLPVSLGQAPDQ
PTPTGTWDVTIPDRASAAGQGIDGALMVVRAPATGAVPVSVKLDYAKFESLYGADWASRL
TFVQFPECYLTTPDDEACQTYEELETENDPESKSLTATVDPAADGTVTPASAPSQPDAGT
GVVQAAYRTSTSVTPAATGDTAVVGALDSGVGSGSFKATSLASNGKWAAGGSSGAFTWSY
PLTVPAPPAGPAPKISFEYNSQTVDGRTAVSSPQSSWIGEGWSYDVGFIERRYRTCKDDR
KTLTSGTPNNTAAKDKTSDLCWASANAVMSLNGQTTELVREPTSNTNPETATELYRPQRD
DGTRVEHRVGAVNGDNNGEYWVVTGRDGTSYYFGQHQVGGGHADTDSVSTVPVFGNHPGE
PCHASAFADSRCGAGKQQAWRWGLDKVVDVHGNTMIVNWKQETNYYAPRKKFKSPEQYDR
HAYPTSIEYGMRPSGLTKPSATIEFNVKQRCLKSDTACDAANFAKTDDPGAYRPWWDTPG
NLNCKSTSKLCPAFPSFWTQLRLDSVTTKAARAGQTGLDPVDTYTLRQSFPEDWYDTSPG
LWLNSITRTGYAPGDTTGTIQSEYGVSFAAYTVGTGSPLRDRLMDRQLPNLVPRSKTDQR
PGFTRPRIGTVSTEYGGDIQVEYTGGCAVEPAEDKGRSNGTCYPVRWSPDGDQRTPKKAW
FNKYVVSSVTETDKVTAHGTPVTTMYEYDGTAWAKSDDEFTRPALRTYSDWKGYRQVSVR
KGARSTSTTSMKNSQSFTVTRYFQGVGGEVKDTTGAHTLIADDAPQFAGMAAETLTYVDS
DGKLLKRHLSFPYSKQTASRARENEDATVGEPLLAHRVGVKRTDEIQAVGSSWRGVRTTT
AVDDTYGLPLQVETSVVKPSGTAETLSDRTCTTTSYVHNTTDWLIGLPKEERVTGTSCAV
QDTADPATQLKSSVRNTYDNLSYGAAPTKGLVTSRAEINGTGTAHSHTIATSYDPLGRVR
TITAPGSGTTETQYTPGDAGGPLTEVKSLNAKGHTTKTTFDPGRGLPLTVTDPNGRVTRN
EYDALGRLVKGWSPSRSSAGQSPSVQISYQPAVATSRVNRPASVTLQTLKDDGTYARTVT
LYDGLQREAQTQTEAHGPGRIIVDTTYNDHGLVREKTGGYLAKGEPATDLFQPRSRSLIP
SLTKNYYDGLERQYRASVYHGDKYKYASFTTHSEIYTESDPPGSTTPKTRTYFDALGRVT
SVKHYSRSSGDTGRTTAYEYDARGYHNKVTDPAGNIWSYIYDTRGRVSSATDPDTGKTET
SYDEADRPNHTTDALQQETFTEYDLLGRVRYVRQGSATASPVKSYTYDDASGGLGKPTSS
VRHTADGDYVNRVTGYDAEYHVTGSETVIPPNSMTTGLSGTYAYTYTYTPTGRPQSVTLP
AKGGLASEKVVTRYNGDGLPESTSGQTWYTADATYSPYGEVLRTVSGAQPYRVWTTNFVN
PHTGTLQRTITDRETAGPNRIADSYYSYDFSGTITSNARASSDAAGTTWDTQCFTYDVMG
ELTHAWTSSVTPDGQGAGCKTAGGTSWGYRTDYAPSSGPVADAPDEATDVTAPDSSLSST
LSAAAPDPTTVSTGETAYRQSFTYDWIGNRATMTDHDTADATKNVTFNYGHGKTVPANGT
TPPYKTQPHTMTWISSTPSGKGSSYAYDATGNTTVRDLYNTTQNLVWNQENKLDSITDDG
TKTTYVYDADGNRLLENSPSGSTLYLGETELTTNATGSITKASRTYTQAGAPVVTRTTTN
GSTTGHKLNVLLADHLGTANTTVEMATGQLVTRRAFKPYGELRGTKPTSWPNKRSYLGVG
IDDTGTGLTHIGAREYDQTSGRFLSADPLIDISDPLQMNGYSYAKNSPVSTSDPDGLRPI
TQCEMGCSNGDDSYQDHLTSNGDGTWSYHYENTHYVYDGEGKVHSTVKVGSDLPLGKKTV
YKPYNFAAQKAFFNVAVSLVFPDPSDWMGCLSGESAKSCGIAATDLPWLKALKLVPDSVI
KKGAKAVEDWLGKSKCTKCFLAGTDVLMADGKTKDIEDIEVGDEVLATDPKTSETGPRKV
TRLIVTEDDKHFNELSIATEDGIEKLTATHEHPFWSPSERRWVDAADLKPGTTLLTDEGT
TVIVTGNRAFSRHARTYNLTVDDLHTYYVLAGQTPVLVHNSNCPLNLEGIDDYLHEQVQR
VVDSYDKTGKPPVGVMQGGADPNNVGVYRGHNIPGGGRDKPFGYWTEMDVWPTEPGGRRS
GMGRIVIGARGEVWYTPHYKPGTWVSIREGCGCGRYAK
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtcatcgcggctgcactgctggtggggttgctgcccgcgcagtcgctcgcgctg
cccccggatcctgcgaaggaggagaccggccgggagtcgttgacccttgaggccctcaag
cgagacgtgccggtgcccggcatgaaggttctcagccgtcatttggagacgctgaggggg
cagatccccaaggatcaggtcgcaccggaagccggcacagtgacgccgccctccaacgtg
agcggctcggtcaccttcgggtcgacgaccacgcccgcatcgacccggaccacggcccaa
caggttgcgctcagccctgtgggatccctgcccgtcagcctcggccaggcccccgaccag
ccgacgccgacgggcacttgggacgtgaccattccggaccgggcctccgcggcaggccag
gggatcgacggcgccctgatggtggtgcgggctcccgccacgggtgcggtgccggtctcc
gtcaagctcgactacgccaagttcgagagcctgtacggcgccgactgggcgtcccggttg
accttcgtgcagttcccggagtgctacctgaccacgccggacgacgaggcgtgccagacc
tatgaggagttggagaccgagaacgacccggagtccaagtccctcaccgcgacggtggac
cccgccgcggacggcacggtgaccccggcctccgcgccctcgcagcccgatgccgggacg
ggcgtcgtccaggcggcctaccgcacttccacgtccgtgaccccggccgccaccggtgac
accgcggtcgtcggcgccctcgactccggagtcggcagcggcagtttcaaggcgacctca
ctcgcgtccaacggcaagtgggcggcgggaggctcctccggcgccttcacctggtcgtac
ccactgaccgtaccggcaccgcccgcgggccccgcgcccaagatctccttcgagtacaac
tcccagacggtggacggccgtaccgccgtctcttccccccagtcctcctggatcggcgag
ggttggagctacgacgtcggcttcatcgagcgccgctaccgcacttgcaaggacgaccgc
aagacactgacctccgggacgcccaacaacacggcggcgaaggacaagacgtccgacctg
tgctgggcgtcggccaacgcggtgatgtccctcaacggccagaccaccgagctggtccgc
gagcccacctccaacaccaaccccgagaccgccaccgagctctaccgcccgcaacgggac
gacggcacccgcgtcgagcaccgggtgggtgcggtcaacggcgacaacaacggcgagtac
tgggtcgtcaccggaagggacggcacgagctactacttcggccagcaccaggtgggcggc
ggtcatgccgacaccgattccgtctccacggttccggtcttcggcaaccacccgggtgag
ccgtgccacgcgagcgccttcgccgactcgcgctgcggtgcgggcaagcagcaggcatgg
cgctggggcctggacaaggtcgtcgacgtccacggcaacacgatgatcgtcaactggaag
caggagacgaactactacgccccgcgcaagaagttcaagtcgcccgagcagtacgaccgg
cacgcctacccgacgtccatcgagtacggcatgcgccccagcgggctgaccaagccgtcc
gcgacgatcgaattcaacgtcaagcagcgctgcctgaagtcggacacggcatgcgacgcg
gcgaacttcgccaagaccgacgaccccggcgcgtaccgcccttggtgggacacccccggc
aacctcaactgcaagtccacctccaagctctgcccggcgttcccgtcgttctggacccaa
ctgcgcctggactcggtgaccaccaaggctgcacgggccggacagaccggccttgacccc
gtcgacacttacacgctgcgccagtccttccccgaggactggtacgacacctcgcccggc
ctgtggctgaactccatcacccgcaccggctacgcccccggcgacaccaccggcacgatc
cagtccgaatacggcgtcagcttcgccgcgtacaccgtgggtaccggatcaccgctgcgc
gaccgactcatggaccggcaactgcccaaccttgtgcccagaagcaagaccgaccagcgc
cccggcttcacccgcccccgcatcggcaccgtctccaccgaatacggcggcgacatccag
gtcgagtacaccggcggctgcgccgtcgagccggccgaggacaagggcaggagcaacggc
acgtgctacccggtccgttggtcccctgacggagaccagcgaacgcccaagaaagcatgg
ttcaacaaatacgtcgtgtcgtcggtgaccgagaccgacaaggtcaccgcgcacggcacg
cccgtcaccaccatgtacgagtacgacggcacggcctgggccaagagcgacgacgagttc
acgcggccggcactgcgcacctacagcgactggaagggctaccgacaggtctccgttcgc
aagggcgcgaggtccacgtccacgacgagcatgaagaacagccagtccttcaccgtcacg
cgctacttccagggcgtgggcggcgaagtgaaggacaccacgggtgcccacaccctcatc
gccgacgacgcaccgcagttcgcgggcatggccgccgagaccctgacctacgtcgactcc
gacggcaagctcctcaagcgccatctgagctttccctactccaagcagaccgccagccgt
gcccgcgagaacgaggacgccacggtgggcgagccgctgctcgcccaccgggtcggcgtc
aagcgcacggatgagatccaggcggtcggctccagttggcgcggtgtgcgcaccacgacc
gccgtcgacgacacatatggactgccccttcaggtcgagacgtccgtggtcaagcccagc
ggcaccgccgagaccctctccgaccggacctgcacgaccacctcgtacgtccacaacacc
accgactggctcatcggtctgcccaaggaagagcgcgtcacgggcaccagctgtgccgtc
caggacaccgcggacccggccacccagctgaagtcgtcagtgcgcaacacctacgacaac
ctcagctacggcgccgccccgaccaagggtctcgtcacatccagggccgagatcaacggc
accggcaccgcgcactcccacaccatcgccaccagctacgacccgctgggccgggtacgc
accatcacagcccccggatcaggcaccaccgaaacgcagtacacccccggtgacgcaggc
ggtccgctcaccgaggtgaagtcactcaacgccaagggacacaccaccaagacgacgttc
gaccccggacgcggcctgcccctgaccgtcaccgaccccaacgggcgcgtgacgcgcaac
gagtacgacgccctcggccgcctggtgaagggctggtccccgtcccgctcgtccgccggc
cagtcgccgagcgtgcagatctcctaccagccggccgtggccacctccagggtcaaccgc
cccgcctcggtgacgctccagaccctcaaggacgacggcacctacgcccgcacggtgacc
ctctacgacggtctgcaacgcgaggcccagacccagaccgaggcccacggtcccggccgg
atcatcgtggacacgacttacaacgaccacggactcgtccgcgagaagaccggtggatac
ctggccaagggcgaaccggccacggacctgttccagcccagatcccgttcactgataccg
agcctcaccaagaactactacgacggcctggaacgccagtaccgcgcctcggtctaccac
ggtgacaagtacaagtacgcctccttcacgacccacagcgagatctacaccgagtcggat
ccgcccggctccacgacgcccaagacccgcacctacttcgacgccctgggccgcgtcacc
tccgtcaagcactacagcaggtcgagcggcgacaccggacgcaccacggcgtacgagtac
gacgcccggggctaccacaacaaggtcaccgaccccgcgggcaacatctggtcctacatc
tacgacacccgcggccgggtgagctccgccaccgaccccgacaccggcaagaccgagacg
tcgtacgacgaggccgaccgccccaaccacaccacggacgccctccagcaggagaccttc
acggagtacgacctgctcggccgggtgaggtacgtgcgccagggctctgcgaccgcgagt
ccggtgaagtcgtacacctacgacgacgcgtccggcggactcggcaagccgacctcctcg
gtccggcacaccgcggacggcgactacgtcaaccgcgtcaccggctacgacgccgagtat
cacgtcaccggcagcgagacggtgatcccaccgaactcgatgaccacgggcctgtccggc
acgtacgcgtatacctacacgtacacgcccactggcaggccccagtcggtcacgctgccc
gcgaagggtggcctggcaagcgagaaggtcgtcacccgctacaacggcgacggcctgccc
gaatcgacctcgggccagacctggtacacggcggacgccacgtactcgccgtacggcgag
gtactgcgcacggtctcaggcgcccagccctaccgcgtatggacgacgaacttcgtcaac
ccccacaccggcaccctccagcgcacgatcaccgaccgcgagacggcgggcccgaaccgc
atcgcggacagctactactcctacgacttctccggcacgatcacctccaacgcccgcgcg
tcgtccgacgcggccgggacgacgtgggacacgcagtgcttcacctacgacgtcatgggc
gagctgacccatgcctggacatcgagcgtcacgccggacggacaaggcgcgggctgtaag
acagcgggcggcacgagttggggctaccgcacggactatgcgccctcatcgggcccggtc
gccgacgcgccggacgaggccacggacgtcacggcccccgattcctcgctgtcgtcgacg
ctgtcggcagcggccccggacccgacgaccgtctccacgggcgaaaccgcctaccgccag
tcgttcacctacgactggatcggcaaccgcgccacgatgaccgatcacgacacggcggac
gcgacgaagaacgtcacgttcaattacggccacggcaagacggtccccgcgaacggcacc
acgccgccgtacaagacgcagccacacacgatgacgtggatcagctccacaccgtcgggc
aagggcagctcctacgcctacgacgcgacaggcaacaccacagttcgggacctgtacaac
accacgcagaacctggtctggaaccaagagaacaagcttgactcgatcacggacgacggc
acgaagacgacctacgtctacgacgccgacggcaaccgcctcctggagaactccccgagc
ggctcgaccctgtacctgggcgagacagagctgacgacgaacgcgacgggcagcatcacc
aaggcatcccgcacgtacacccaggccggcgcccccgtggtgacccgaacgacgaccaac
ggctcgaccacgggccacaagctgaacgtcttgctcgccgatcacctcggcacggcgaac
acgacggtggaaatggctaccggccaactcgtcacccgccgggccttcaagccgtacggc
gaactccggggcacgaaaccgacgtcgtggccgaacaagcgcagctacttgggcgtcggt
atcgatgacacgggcaccgggctgacgcatatcggggcgcgcgagtacgaccagacttcg
ggccgcttcctctcggccgacccgctgatcgacatctccgacccgctccagatgaacggg
tacagctacgcgaagaacagcccggtcagcaccagcgacccggatggcctgaggccgatc
acccagtgcgagatgggctgctcaaacggcgatgactcgtatcaggaccatctgacctcg
aacggtgacggcacctggtcgtaccactacgagaacacgcactacgtctacgacggggaa
ggcaaggtacacagcaccgtcaaggtgggcagtgacctaccgctcggcaagaagacggtg
tacaagccgtacaacttcgccgcgcagaaggcgttcttcaacgtcgccgtctccctcgtc
ttccccgatccctcggactggatgggctgcctctccggcgagagcgcaaagagctgcggc
atcgcggcaacagacctcccctggctcaaggccctgaagctggtccccgactcggtgatc
aagaagggggccaaggcggtcgaggactggctcgggaagagcaagtgcaccaagtgcttc
ctcgctggcaccgacgtcctgatggccgacggcaagaccaaggacatcgaagacatcgag
gtcggggacgaagtcctcgccaccgacccgaagaccagcgagacgggcccgcgcaaggtc
acgcgcctgatcgtcaccgaggacgacaagcacttcaacgagctgtccatcgccacagag
gacggcatcgagaagctcacagccacacacgagcacccgttctggtccccgtcggagcga
cgctgggtcgacgcggcggatctgaagccgggcacgaccctcctcaccgacgagggcacc
accgtcatcgtcaccgggaaccgggctttcagcaggcatgcgcgcacgtacaacctgacg
gttgatgacctgcatacgtactatgtgctggcgggccagactccggtactcgttcacaac
agcaactgccctctgaatctcgaaggcatcgatgactacctgcacgagcaggtgcagcgt
gtcgtcgactcttacgacaagacaggtaaaccccctgtcggcgttatgcaaggcggtgcc
gatccgaataacgtcggcgtgtatcgagggcacaatattccaggcggcggaagggataag
cccttcggctactggaccgagatggatgtctggccgaccgagcccggcggaaggcgaagc
ggaatggggcgtatcgtcatcggggcgcggggtgaggtctggtatacgcctcattacaag
ccaggtacgtgggtatcaattcgagaggggtgcggctgtggccggtacgccaaatga
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