Shigella dysenteriae Sd197: SDY_0501
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Entry
SDY_0501 CDS
T00306
Symbol
hemB
Name
(GenBank) 5-aminolevulinate dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00860
Porphyrin metabolism
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
sdy01240
Biosynthesis of cofactors
Module
sdy_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
sdy_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SDY_0501 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdy04147
]
SDY_0501 (hemB)
Enzymes [BR:
sdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SDY_0501 (hemB)
Exosome [BR:
sdy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SDY_0501 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
ComA
Motif
Other DBs
NCBI-ProteinID:
ABB60708
ShiBASE_China:
SDY0501
UniProt:
Q32IZ9
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All DBs
Position
485847..486854
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AA seq
335 aa
AA seq
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MHLNSTNIRQTMTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEA
MPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQT
VPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMD
GQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREA
IRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAID
EEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccttaattccacaaacatcaggcagaccatgacagacttaatccaacgccctcgt
cgcctgcgcaaatctcctgcgctgcgcgctatgtttgaagagacaacacttagccttaac
gacctggtgttgccgatctttgttgaagaagaaattgacgactacaaagccgttgaagcc
atgcctggcgtgatgcgcattccagagaaacatctggcacgcgaaattgaacgcatcgcc
aacgccggtattcgttccgtgatgactttcggcatctctcaccataccgatgaaaccggc
agcgatgcctggcgggaagatggactggtggcgcgtatgtcgcgcatctgcaagcagaca
gtgccagaaatgattgtcatgtcagacacctgcttctgtgaatacacttctcacggtcac
tgcggtgtgctgtgcgagcatggcgtcgacaacgacgcgactctggaaaatttaggcaag
caagccgtggttgcagctgctgcaggtgcagacttcatcgccccttccgccgcgatggat
ggccaggtacaggcgattcgccaggcgctggacgctgctggctttaaagatacggcgatt
atgtcgtattcgaccaagttcgcctcctccttttatggtccgttccgtgaagctgccgga
agcgcattaaaaggcgaccgcaaaagctatcagatgaacccaatgaaccgtcgtgaggcg
attcgtgagtcactgctggatgaagcccagggcgcagactgcctgatggttaaacctgct
ggagcgtacctcgacatcgtgcgtgagctgcgtgaacgtactgaattgccgattggcgcg
tatcaggtgagcggtgagtacgcgatgattaagttcgccgcgctggccggtgctatagat
gaagagaaagtagtgctcgaaagcttaggttcgattaagcgtgcgggtgcggatctgatt
ttcagctactttgcactggatttggctgagaagaagattctgcgttaa
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