Shigella dysenteriae Sd197: SDY_2065
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Entry
SDY_2065 CDS
T00306
Symbol
yceC
Name
(GenBank) conserved hypothetical protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdy03009
]
SDY_2065 (yceC)
Enzymes [BR:
sdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SDY_2065 (yceC)
Ribosome biogenesis [BR:
sdy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SDY_2065 (yceC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
ABB62160
ShiBASE_China:
SDY2065
UniProt:
Q32EU5
LinkDB
All DBs
Position
complement(1874864..1875823)
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AA seq
319 aa
AA seq
DB search
MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL
EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDYILVLNKPSGTAVHGGSGLS
FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV
RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR
THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI
EAPMDEGLKRCLQKLRNAR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagagactccatccgtaaaaattgttgctatcaccgctgacgaagcggggcaa
cgtatcgataactttttgcgtacccaattgaaaggcgtaccaaaaagtatgatttaccgt
attttgcgtaaaggcgaagtacgggtgaacaaaaaacgtattaagcctgaatataaactc
gaagcgggtgatgaggtgcgtatcccaccggttcgcgttgctgagcgggaagaagaggcg
gtttcaccacatctgcaaaaggtggcggcgctggcggacgtcatcttatatgaagatgat
tatatcctggtgctgaataaaccttccggtacggcggtacatggcggcagtggtttaagc
ttcggcgttatcgaaggtttgcgggcgttgcgcccggaagcgcggttccttgaactggtt
catcgtctcgaccgggacacttcaggtgtgttgctggtagcgaaaaaacgctcggcgttg
cgttctctgcatgagcaattacgtgaaaaagggatgcaaaaagattacttggcgctggtg
cgcggtcagtggcagtcgcatgtgaagagcgttcaagcgccgttactgaaaaatattctg
caaagcggcgaacgtatcgtgcgtgtgagtcaggaaggcaaaccgtcggaaacacgcttt
aaagtggaagaacgctatgcatttgccaccctggtgcgctgtagcccggtaaccggacgt
actcatcagatccgtgtgcatacacagtatgcgggtcatccgattgcctttgacgatcgc
tacggtgaccgtgaatttgacagacagctcactgaagcaggcacgggattaaatcgtctg
ttcctgcacgccgcagcgttgaagtttacccatccggggaccggtgaggtgatgcgtatc
gaagcgccgatggatgaaggtttgaagcgttgtttgcaaaagctgcgtaacgcgcgctaa
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