Shigella dysenteriae Sd197: SDY_3217
Help
Entry
SDY_3217 CDS
T00306
Name
(GenBank) putative transport periplasmic protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SDY_3217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdy02000
]
SDY_3217
Transporters [BR:
sdy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SDY_3217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABB63226
ShiBASE_China:
SDY3217
UniProt:
Q32BS9
LinkDB
All DBs
Position
2978312..2979919
Genome browser
AA seq
535 aa
AA seq
DB search
MYTRNLLWLVSLVSAAPLYAADVPTNTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIV
LDLFEGLVWMDGEGQVQPAQAERWEILDGGRRYIFHLRSGLQWSDGQPLTAEDFVLGWQR
AVDPKTASPFAGYLAQAHINNAAAIVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTML
AWPTLFPVPHHVIAKHGDSWSKPENMVYNGAFVLDQWVVNEKITARKNPKYRDAQHTVLQ
QVEYLALDNSVTGYNRYRAGEVDLTWVPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEK
PPFNDVRVRRALYLTVDRQLIAQKVLGLRTPATTLTPPEVKGFSVTTFDELQKPMSERVA
MAKALLKQAGYDASHPLRFELFYNKYDLHEKTAIALSSEWKKWLGAQVTLRTMEWKIYLD
ARRAGDFMLSRQSWDATYNDASSFLNTLKSDSEENVGHWKNAQYDALLNQAMQITDATKR
NALYQQAEVIINQQAPLIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYIKAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgcgaaatttattatggctggtcagcctggtaagtgcggctcctctctacgct
gctgacgttcccaccaacacaccgctcgctccgcaacaagtctttcgttacaacaatcat
agcgacccaggtacgctcgacccgcaaaaggtggaggagaatactgccgcgcagattgtg
ctggatctgtttgaaggtctggtatggatggacggtgaaggccaggtgcagcccgctcag
gctgaacgctgggagatactggacggcggcaggcgctatattttccatctgcgtagcggt
ttgcagtggtccgacggtcagcctctgacggcagaggattttgtcctcggctggcagcgc
gcggttgacccgaaaacggcaagcccttttgctggctatctggcacaggcgcacattaac
aatgccgcggctattgttgcgggtaaagcagatgttacatcgctgggtgtcaaagcgacg
gatgatcgtactcttgaagttacgcttgagcagccggttccttggttcacgacgatgctc
gcctggccgacgctgttcccggttcctcatcatgtcatcgctaaacatggcgatagctgg
agtaagccagagaacatggtttacaacggtgcctttgtgcttgatcagtgggtagttaac
gaaaagattactgcacgcaaaaatccaaagtaccgcgatgcgcaacatacagtattgcaa
caggttgagtatctggcgctggataattcggtcaccggctacaaccgctatcgcgcggga
gaggtcgatctcacctgggttccggcgcagcaaattcccgccattgaaaaatcactgcct
ggcgagctacgaattattccgcgtctgaacagcgaatattacaacttcaaccttgagaaa
ccgccatttaacgatgtgcgagtgcgtcgggcgctatatcttacggttgatcgacagctt
attgcgcaaaaggtactggggttgaggacgcccgcaaccacgctgacgccgccagaggta
aaaggctttagcgtgacgacgttcgatgaactgcaaaagccaatgagtgagcgcgtcgcg
atggcaaaagccttgctgaaacaggcgggatacgacgcctctcatccgctacgctttgag
ctgttctacaacaagtacgatctgcatgaaaagaccgcgatagcgttgtcttccgaatgg
aaaaaatggctgggtgcacaggtgacgctgcgcacaatggagtggaaaatctatcttgat
gcccgacgagccggtgatttcatgctgtctcggcagtcgtgggatgcgacgtacaatgat
gcttccagcttcctgaacacgctcaaaagcgatagtgaagaaaacgtcggtcactggaaa
aatgcgcagtatgacgccttactaaaccaggccatgcagatcactgatgcgacaaagcgt
aatgcgttgtatcagcaggcagaagtgattatcaaccagcaggcaccgctgattcccatc
tattatcagccgttaatcaaactgcttaaaccctacgttggcggttttccgctgcataat
ccccaggattatgtctacagcaaagagttgtatatcaaggcacattga
DBGET
integrated database retrieval system
