Shigella dysenteriae 1617 (serotype 1): Asd1617_05814
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Entry
Asd1617_05814 CDS
T02933
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sdz
Shigella dysenteriae 1617 (serotype 1)
Brite
KEGG Orthology (KO) [BR:
sdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdz03019
]
Asd1617_05814
03009 Ribosome biogenesis [BR:
sdz03009
]
Asd1617_05814
Messenger RNA biogenesis [BR:
sdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Asd1617_05814
Ribosome biogenesis [BR:
sdz03009
]
Eukaryotic type
Pre-60S particles
RNases
Asd1617_05814
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHA68641
UniProt:
A0A0A7A3Y6
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All DBs
Position
complement(4080614..4081276)
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AA seq
220 aa
AA seq
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MESLFLLNRTDSWSPLMGKTSMIHAIVDQYSHCEWVENSMSANENNLIWIDLEMTGLDPE
RDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMG
DREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELA
RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
ttggagagtttatttttactcaatcgtacagactcctggtcgcccctgatgggcaaaaca
tctatgatacacgcaattgtggatcaatatagtcactgtgaatgggtggaaaatagcatg
agtgccaatgaaaacaacctgatttggatcgatcttgagatgaccggtctggatcccgag
cgcgatcgcattattgagattgccacgctggtgaccgatgccaacctgaatattctggca
gaagggccgaccattgcagtacaccagtctgatgaacagctggcgctgatggatgactgg
aacgtgcgcacccataccgccagcgggctggtggagcgcgtgaaagcgagcacgatgggc
gatcgtgaagctgaactggcaacgctcgaattcttaaaacagtgggtgcctgcgggaaaa
tcgccgatttgcggtaacagcatcggccaggatcgtcgcttcctgtttaaatacatgccg
gagctggaagcctacttccactaccgttatctcgatgtcagcaccctgaaagagctggcg
cgccgctggaagccggaaattcttgatggttttaccaagcaggggacgcatcaggcgatg
gatgatatccgtgaatcggtggcggagctggcttactaccgcgagcattttatcaagctg
taa
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