Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2678
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Entry
SCH_2678 CDS
T00240
Symbol
ffh
Name
(GenBank) 45S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec02024
Quorum sensing
sec03060
Protein export
sec03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCH_2678 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCH_2678 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCH_2678 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sec02044
]
SCH_2678 (ffh)
Enzymes [BR:
sec01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SCH_2678 (ffh)
Secretion system [BR:
sec02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCH_2678 (ffh)
Eukaryotic Sec-SRP protein
SCH_2678 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_16
AAA_24
Helicase_RecD
AIP3
AAA_33
APS_kinase
GlnD_UR_UTase
AAA_14
YqeC
KTI12
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AAX66584
UniProt:
Q57L28
LinkDB
All DBs
Position
complement(2834378..2835739)
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AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtggg
cgccttactgaagacaacgttaaagagacgctgcgcgaagtgcgcatggcgctgctggag
gctgacgttgcgctgccggtagtgcgtgagttcatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaacaagagcctgaccccagggcaggagttcgtcaagattgtccgtagc
gaactggttgcggcgatgggcgaagagaaccagacgctgaatttagctgcgcagccgcca
gccgtagtattgatggcgggtctgcagggggcgggtaaaaccaccagcgtcggtaagttg
ggtaaattcttgcgcgagaagcacaagaagaaagtgctggtcgtctctgccgacgtctat
cgcccggcggcgatcaaacagctcgaaacgctggctgagcaggttggcgtggatttcttc
ccgtctgatgttggccagaaaccggttgatatcgtcaacgccgcgctgaaagaagcgaag
ctcaaattctacgacgtgctgctggtggataccgccggtcgtctgcacgttgacgaagcg
atgatggacgaaatcaaacaggtccacgcttctatcaagccagtagaaacgctgtttgtc
gtcgatgcgatgaccggtcaggatgcggcgaataccgcaaaagcctttaacgaagcgctg
ccgttaaccggcgtggtgctgaccaaagttgatggtgatgctcgtggcggtgcggcgctc
tctattcgtcatatcaccggcaagccgattaaattcctcggtgtcggcgagaaaaccgac
gcgctggagccgttccacccggatcgtatcgcctcgcgtattctcggcatgggcgacgta
ctgtctcttatcgaagatatcgaaagcaaagttgaccgcgcacaggctgagaagctggcg
accaaactgaagaaaggcgacggtttcgacctgaacgacttcctggaacagctcaaacag
atgaaaaacatgggcggtatggccagtctgatgggcaaattaccgggcatggggcagatt
ccggacaacgttaaatcgcagatggatgacaaggtgctggtgcgtatggaagcgatcatc
aattcgatgacgctgaaagagcgcgcgaagccggaaatcatcaaaggttcccgcaagcgt
cgtatcgcgcagggctgtgggatgcaggtgcaggacgttaaccgccttctgaaacagttc
gacgacatgcagcgcatgatgaagaagatgaagaagggcgggatggcgaagatgatgcgg
agtatgaaggggatgatgccgccaggcttcccgggtagataa
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