Salmonella enterica subsp. enterica serovar Cubana: CFSAN002050_20955
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Entry
CFSAN002050_20955 CDS
T02734
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
seec
Salmonella enterica subsp. enterica serovar Cubana
Brite
KEGG Orthology (KO) [BR:
seec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seec03016
]
CFSAN002050_20955 (truD)
Enzymes [BR:
seec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFSAN002050_20955 (truD)
Transfer RNA biogenesis [BR:
seec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFSAN002050_20955 (truD)
Prokaryotic type
CFSAN002050_20955 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGQ74229
LinkDB
All DBs
Position
complement(4001632..4002681)
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AA seq
349 aa
AA seq
DB search
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVAD
ALAKFLKIHTREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEE
LPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgacaatctcacctggctgcacggaaaaccacaaggtagcggattgctg
aaagcgaatccggaagattttgtggtggttgaagatttaggctttacgccggatggtgaa
ggcgagcacattctgctgcgtattttgaaaaacggttgcaatacccgttttgtcgctgac
gcgctggcgaaattcctgaaaattcacactcgcgaagtgagctttgccgggcaaaaagat
aaacacgccgttaccgagcagtggctgtgcgcgcgcgtgccggggaaagagatgcccgat
ttcagcgcctttcagctggaaggttgtaaagtgctggaatacgcgcgtcacaagcgtaag
ctgcgtttaggcgcgctgaaaggcaatgcctttacgctggtgttgcgtgaaataagcgat
cgccgcgatgtcgaaacacgattgcaggcgattcgcgatggcggcgtgccgaactatttc
ggcgcacagcgattcggcattggcggcagcaacttgcagggcgcgctgcgctgggcgcaa
agtaacgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcacgtagc
gcgttgtttaatcaaattgttcaccagcggctgaagaaaccagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgtggaagctggttcgtcgcgacatctgaagaa
ctgcctgaattgcagcgccgggtagacgaaaaagagctgatgattacagcgtcgttgccg
ggcagcggagagtggggaacacagcgtgcggcgctggcgtttgagcaagatgccattgcc
caggaaacggtgttgcaatcgctgttgctgcgcgaaaaagtagaggcgtcgcgcagagcg
atgctgctttatccgcaacaattaagctggaactggtgggatgacgttaccgtcgagtta
cgtttctggctgcccgcaggcagttttgccaccagcgtagtaagggaactgatcaacaca
atgggtgattatgcgcatattgctgagtaa
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