Salmonella enterica subsp. enterica serovar Pullorum: I137_04670
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Entry
I137_04670 CDS
T02790
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
seep
Salmonella enterica subsp. enterica serovar Pullorum
Pathway
seep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I137_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seep03400
]
I137_04670
Enzymes [BR:
seep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I137_04670
DNA repair and recombination proteins [BR:
seep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
I137_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
MFD_D3
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
UB2H
SNF2-rel_dom
ERCC3_RAD25_C
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
AGS62672
LinkDB
All DBs
Position
complement(1061902..1065348)
Genome browser
AA seq
1148 aa
AA seq
DB search
MPEKQRYTLPTKAGDQRQLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEIR
QFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQRGVLIVPVNTLMQRVCPH
SYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPY
RLDFFDDEIDSLRLFDADTQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD
AEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLVVNTGSLETSAERFQADTL
ARFENRGVDPMRPLLPPEALWLRVDELFSELKRWPRLQLKTDHLPEKAANTNLGFQKLPD
LAIQAQQKAPLDALRKFLESFSGPVIFSVESEGRREALGELLARIKIAPKRILRQDEAQD
AGRYLMIGAAEHGFIDTQRNLALICESDLLGERVARRRLDSRRTINPDTLIRNLAELHVG
QPVVHLEHGVGRYAGMTTLEAGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESA
PLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTL
LAQQHYDNFRDRFANWPVRIEILSRFRSAKEQTQILAEAAEGKIDILIGTHKLLQSDVKL
RDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPP
ARRLAVKTFVREYDSLVVREAILRETLRGGQVYYLYNDVENIQKAAERLAELVPEARIAI
GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG
EEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV
NTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEG
NEKGGTIEFAEKNHVDPAWLIGLLQKQPQHFRLDGPTRLKFIQDLSERKTRIDWVRQFMQ
QLEENAIA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaacaacgttacacgctgccgacaaaagcgggcgatcagcgccagttgggc
gaacttaccggtgccgcctgcgctacgctggtggcggagatagccgaacgccatgccggt
ccggtggtactcatagcgcctgacatgcaaaatgctctgcgattgcatgatgaaatccgc
cagtttaccgatcagatggtgatgaacctggcggactgggaaacgctaccgtatgacagc
ttctccccgcatcaggaaattatctcttcgcgcctgtccacgctctaccagttgccgtcg
atgcagcgcggcgtcttgattgtaccggtaaacaccctgatgcagcgcgtttgtccgcat
agctatctgcatggtcatgcgctggtgatgaaaaaaggccagcggctgtcccgcgacgct
ctgcgcgcgcagcttgacagcgccggttatcggcatgtcgatcaggtgatggagcatggc
gaatacgcgacgcgcggcgcgctgttggatctctttccgatgggcagcgaacagccttat
cgcctcgacttttttgatgatgaaatcgacagcctgcgtctgtttgacgcggatacccag
cgtacgctggaggaggtcgaggccatcaatttgttgcccgcgcacgaatttcctaccgac
aaagccgctattgagcttttccgtagccagtggcgcgatacctttgaggtaaaacgcgac
gccgaacacatctatcagcaggtcagcaaaggcaccttgcccgccgggatcgaatactgg
cagccgctctttttcagcgaaccgttaccgccattatttagctatttccccgccaatact
ctggtggtgaatactggctcgctggaaaccagcgccgaacgctttcaggccgatacgctg
gcgcgttttgaaaatcgcggcgtcgatcctatgcgcccgcttttgccgccggaagccctc
tggctacgggtagatgagctcttttccgagcttaaacgctggcctcgcctccagcttaaa
accgaccatctgccggaaaaagccgccaataccaatcttggtttccagaaattaccggat
ttggctatccaggcacagcagaaagcgccgctggacgcgctgcgtaagttcctcgaatct
ttcagcggcccggtgattttttctgtggaaagcgaaggacgccgcgaagcgctgggagag
ctcctggctcgcataaaaatcgcgccgaagcggatattacgccaggacgaggcgcaggat
gcgggacgctatctgatgattggcgccgcagaacatggctttatcgacacccaacgcaat
ctggcgctgatttgtgaaagcgatcttttgggtgagcgggtggcgcgtcgccgcctggat
tcccgccgcacgatcaacccggatacgttgattcgtaacctggcggagctccacgtcggt
cagccggtagtgcatctggagcacggcgtcggacgctatgccggcatgaccactctggag
gctggcggcatcaagggtgagtatctgatgctcacctacgccaatgacgccaaactgtat
gtgccggtctcctcattgcatctgattagccgctatgccggcggcgcggaagaaagtgcg
ccgctgcataaactgggcggcgacgcctggtcgcgcgcccggcagaaagcggcggaaaaa
gtgcgcgatgtcgcagcggaactgttggatatttatgcgcaacgggcggcaaaagagggg
tttgcctttaagcatgatcgtgagcagtatcagttattctgcgacagcttcccgtttgaa
acgacgcccgatcaggcacaggcgattaacgccgtattgagcgatatgtgccaaccgctg
gcgatggacaggctggtgtgcggcgacgtcggcttcggcaaaaccgaagtggcgatgcgc
gccgcgttcctggcagtggaaaaccataaacaagtagcggtactggtgccaaccacgctg
ctggcgcagcaacactatgataacttccgcgaccgtttcgccaactggccggtacgcatt
gagattctgtcccgctttcgcagcgccaaagagcagacacaaatcctggcggaagccgcc
gagggtaagatcgatattctgatcggtacgcataaactgctacaaagcgatgtgaagctg
cgcgacctgggcctgctgattgtcgatgaagagcaccgtttcggcgtgcgccacaaagag
cgaattaaggcgatgcgcgccgatgtcgatattctgacgctcacggcgacgccgatcccg
cggacgctgaatatggcgatgagcggtatgcgcgatctctccattatcgccactccccct
gcccgtcgtctggcggtaaaaacctttgttcgcgagtatgatagcctggtagtaagggaa
gcgattctgcgtgaaaccctgcgcggcggtcaggtttactatttgtacaatgacgtcgaa
aatattcagaaagccgcagagcggctggcggaactggtaccggaagcgcgaatcgctata
ggccacgggcagatgcgtgaacgtgagctggaacgggtcatgaacgatttccaccatcaa
cgttttaacgtgctggtgtgtactaccattatcgaaacggggatcgacattcccaccgct
aacacgatcatcattgaacgcgcggatcatttcggcctcgcgcagttgcaccagctgcgt
ggccgcgttgggcgctcgcaccaccaggcctacgcctggctgttgacgccacatcctaag
gccatgaccaccgatgcgcaaaaacggctggaggcgattgcgtcgctggaggatttaggc
gccgggtttgcgctggcgacccacgacctggagatccgcggcgcgggcgaactgcttggc
gaagagcaaagcggctcaatggaaaccattggcttctcactctacatggaactgctggaa
aacgccgtcgatgcgctgaaagcaggccgcgaaccctcgctggaagatctcaccagtcag
caaacggaagtcgagctgcgaatgccgtcgttgctgccagatgattttattccggatgtt
aatacccggctgtcattctataaacgcattgccagcgcgaagaacgaaaacgagctggag
gagatcaaagtggaattgatcgaccgcttcggcctgctgcccgatccggcgcgtaatctg
ctggatatcgcccgcctgcgccaacaggcgcaaaagctcggcatccgaaaactggagggt
aacgagaaaggcggaacgattgagttcgccgagaaaaaccacgttgaccccgcctggctt
atcgggttgctgcaaaaacagccgcagcatttccgtctggatggcccgacgcgcctcaag
tttattcaggatttaagcgaacgtaaaacgcgtatagactgggtacgccagtttatgcag
caactggaagaaaacgctattgcataa
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integrated database retrieval system
